Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2738 ATGGAAAACCTTCCCCCAATGATTTACAAAAACCCCATTAAGAGAACCTCAAGAGGATCTTCAAACTACCTTGGTGTCAGAAGAAGGCCATGGGGAAGATTTGCTGCAGAGATTAGGAACCCTTATAGCAAAGAAAGACACTGGCTAGGCACATTTGACACTGCTGAAGAGGCTGCAATAGCTTATGATCTTGCATCCATCAAGATTTGTGGCATTCAAAATGCTAGAACAAATTTCCATTACCCTTTTATGCATTTTCCTTCTCCTCATCATCCTCCTTCTATTTCACTATTGCCTTTGCCACCACCACAAATAACAACAACAACCTCTGAGTTTGAAGCGAGTGATGAGACAACAAATGCAATTGGTCATAGTGATGATGATGAATCTCTTGTTATTGCTTCCATCTTGCAAAGCTTTTCTTGTTCCGGAAACTGTTCTCTTTAG 447 0.4049 MENLPPMIYKNPIKRTSRGSSNYLGVRRRPWGRFAAEIRNPYSKERHWLGTFDTAEEAAIAYDLASIKICGIQNARTNFHYPFMHFPSPHHPPSISLLPLPPPQITTTTSEFEASDETTNAIGHSDDDESLVIASILQSFSCSGNCSL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2738 148 ProSiteProfiles CUT domain profile. 1 64 IPR003350 GO:0003677
Aev05g2738 148 ProSiteProfiles AP2/ERF domain profile. 22 80 IPR001471 GO:0003700|GO:0006355
Aev05g2738 148 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Aev05g2738 148 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Aev05g2738 148 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Aev05g2738 148 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF088 1 139 - -
Aev05g2738 148 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 139 - -
Aev05g2738 148 PIRSF PTI6 103 141 IPR017392 GO:0003700
Aev05g2738 148 PIRSF PTI6 7 88 IPR017392 GO:0003700
Aev05g2738 148 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
Aev05g2738 148 SUPERFAMILY DNA-binding domain 21 81 IPR016177 GO:0003677
Aev05g2738 148 SMART rav1_2 22 86 IPR001471 GO:0003700|GO:0006355
Aev05g2738 148 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2738 Aev-Chr5 28622912 28623358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2738 8 81 AP2-EREBP Transcription Factor Family AT1G12890 62.025 8.66e-27 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g2738 AP2 6.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2738 - - gmx:100816937 176.407