Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2709 ATGATTGAGCCGAACTTCGTCGATGAAATAGATTGCAGCAGCTTCTTCGACCACATTGACGACCTCCTAGATTTCCCCGCCGACGACGCAGCCACCGCTGACGCCTCCCTTCCGGTCGCCGCTGCCGAGAACTATGAAGCTCCGGCGGCGAGTTTCTTTCCCGCCGAGATGACCGATGCTCTTCCGGCTTCCGCCTCAGCTTTCCCCGGCGACGCAGCCGCGACGGACCTCTCGGCGGAGCTCTCTGTTCCGTATGAAGACATTGTGCAATTGGAATGGCTGTCCAATTTTGTGGAGGACTCATTCTCTGCTGGGGGAAGCCTCACCATGAAGAAAGTGGAGCCACCATCATGTACCACCAATGAATTCCAATTCCAGATATCCAGCCCAGTTTCTGTCCTTGAGACCACCAACTCCTGCTCCGCCGCCAACAACACCACCGCCGTGCCTTTCAGCCCGGAGATTTACATTCCGGTGCCGCCTTGCGTGCGCGCACGCAGCAAGCGTCACCGCCCTGCACCCTCCAACAACGATGTTGCCACTTCCAAGGCCTCTTCATTATCAGATTATGATGAGAATAATCTCACAGAGCATAATAATAAGAAGAAAACGAAAAGGAAAAGCAACAAGGTGGCAAACAATCCTTTAGCAGAATTGGATGATGATAGTGATGAGAAGAATGAAGGAGGAGTGATGAGGAAATGCATGCACTGTGAGATAAGCAAGACGCCGCAGTGGAGGGCAGGGCCAATGGGGCCCAAAACACTCTGCAATGCCTGCGGTGTTCGGTACAAGTCAGGGCGGCTATTCCCCGAGTACCGGCCGGCGGCGAGCCCAACGTTCTGCCCGGCGGTGCACTCCAATTCCCATAAGAAGGTCCTTGAAATGAGAATCAAGATAGGGAAGGGATCCTCCTCTGGCCTCGCTCACACCATCTGA 939 0.5453 MIEPNFVDEIDCSSFFDHIDDLLDFPADDAATADASLPVAAAENYEAPAASFFPAEMTDALPASASAFPGDAAATDLSAELSVPYEDIVQLEWLSNFVEDSFSAGGSLTMKKVEPPSCTTNEFQFQISSPVSVLETTNSCSAANNTTAVPFSPEIYIPVPPCVRARSKRHRPAPSNNDVATSKASSLSDYDENNLTEHNNKKKTKRKSNKVANNPLAELDDDSDEKNEGGVMRKCMHCEISKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKKVLEMRIKIGKGSSSGLAHTI* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2709 312 PIRSF Txn_fac_GATA_plant 1 310 IPR016679 GO:0003677|GO:0005634|GO:0045893
Aev05g2709 312 ProSitePatterns GATA-type zinc finger domain. 235 260 IPR000679 GO:0006355|GO:0043565
Aev05g2709 312 CDD ZnF_GATA 234 291 IPR000679 GO:0006355|GO:0043565
Aev05g2709 312 ProSiteProfiles GATA-type zinc finger domain profile. 233 265 IPR000679 GO:0006355|GO:0043565
Aev05g2709 312 PANTHER GATA TRANSCRIPTION FACTOR 8 1 304 - -
Aev05g2709 312 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 233 292 - -
Aev05g2709 312 MobiDBLite consensus disorder prediction 166 228 - -
Aev05g2709 312 MobiDBLite consensus disorder prediction 174 193 - -
Aev05g2709 312 Gene3D - 231 279 IPR013088 GO:0006355|GO:0008270
Aev05g2709 312 Pfam GATA zinc finger 235 268 IPR000679 GO:0006355|GO:0043565
Aev05g2709 312 PANTHER GATA TRANSCRIPTION FACTOR 1 304 - -
Aev05g2709 312 SMART GATA_3 229 279 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2709 Aev-Chr5 28444440 28447608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2709 19 297 C2C2-Gata Transcription Factor Family AT4G32890 39.310 5.31e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev05g2709 GATA 1.2e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2709 - - gmx:100815693 322.013