Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2707 ATGCCACAATTGATGTTGTTTGAAAGGTGCTTGGATTCTCAATTATGGCATGCTTGTGCTGGTTCCATGGTTCAAATGCCACCTCTAAACTCAAAAGTCTTGTACTTTCCTCAAGGGCATGCAGAGCATGCTCATGGGAGAGTAGATTTTGGGAACAGCAGAATTCCCCCATTCATCCCTTGCAGGGTGTCTGCACTGAGATACATGGCAGAAGCAGACACTGATGAGGTCTTTGTGAAATTGGGGCTGACCCCTTTGAGTCATAATGAATTGGATTTGGAAGATGATTGTTGCTTCTTAGAGGGTCATGAGAAACTAGCTTCCTTTGCCAAGACACTTACACAATCTGATGCCAACAATGGTGGAGGGTTCTCTGTGCCTCGTTACTGTGCTGAGACAATCTTCCCAAGGCTGGACTATTCTGCTGATCCTCCTGTTCAGACCATTGTGGCCAAGGATGTGCATGGACAGAGCTGGAAGTTCAGGCATATCTATAGAGGGACACCCAGGAGGCATCTTTTGACCACAGGATGGAGCAATTTTGTGAGCCAGAAGAAGCTTCTTGCTGGGGACTCCATTGTGTTCCTGAGAGATACTGAGAATGGTGATCTCTGTGTTGGGATAAGAAGGGCCAAGAAGGTGTTATTTGGAAGTGAAAATAGTACTGAGGAGGCCTCATTTAGTTGGAACAAGATAGCAGCACCTTTATTACTTGGTGAGGGTGAGAGTGAGGTGGGAAGAAGAGTTGGTGCTGAATCTGTTCTTGAGGCTGTGAATTGTGCTGTTAATGGAAGACCCTTTGAGGTTGTTTACTACCCCAGAGGAAGCACCCCTGAGTTCTGTGTTAAGGCCTCACTTGTTAGGGATGCAATGAAAGTACAGTGGTGTTCTGGAATGAGGTTCAAGATGCCCTTTGAGACAGAGGATTCTTCTAGGATCAGTTGGTTCATGGGAACCATTTCTTCTCTCCAGGTTGCAGATCCCATTCATTGGCCTGATTCCCCATGGCGTCTTCTACAGGTGGTGTGGGATGAACCAGATTTACTACAAAATGTTAAGTGTGTGAACCCTTGGTTGGTTGAACTAGTCCCAAACATACCAACCTACACTCATCATCTTTCTCCATTCTCACCCCCAAGAAAGAAGCCAAGGTTTCTACAGAACCCTGAATTCAACCACATAAACCAAATTCCAATGCCAGCATTTTCAAGCAATCTTCTCATCAGTCACACTACAAATAACTCCCTATGTAACATCCAAGACAATAACAGTATTTGTGCAGACATACAGGGAGCCAGGCATGCTCAATTTGGACTGTCTCCATTTGATTCTCCCTTCAACAAGCTACCATCACAATCACTACACTTGCCACTTAGGCCTCCTTGTGGGCCCAATAATAAGAGGAGCACCACTAAGAACAATCTTGATATATCTTGCTTGTTGACTATTGGAATTGGAAATTCTGGCCATAACTTGAAGGACTTAACCAATGAAGTGAAATCAACACCACCCCACATTTTGTTGTTTGGAAAACTGATTCACACTGAACAGAAGAGTTCAAATAGTAGTTTCTGTGCTAATGGGAATAGTTCATCTGAAGGGACTTTGCAGAAGACATCAAATGCTAATTCTGATGGCATGGCTTCTTCTGCTTTGCATCAAGATAGTCCAACAGAGAATTCTTCTGATGGAGGGTCTCCTTGGTATAAAGACCAGCACAAATCTGATCTTAGAACCGAAAATGTTAACCTGTTATGTTTAGCCTTATAG 1770 0.4395 MPQLMLFERCLDSQLWHACAGSMVQMPPLNSKVLYFPQGHAEHAHGRVDFGNSRIPPFIPCRVSALRYMAEADTDEVFVKLGLTPLSHNELDLEDDCCFLEGHEKLASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTIVAKDVHGQSWKFRHIYRGTPRRHLLTTGWSNFVSQKKLLAGDSIVFLRDTENGDLCVGIRRAKKVLFGSENSTEEASFSWNKIAAPLLLGEGESEVGRRVGAESVLEAVNCAVNGRPFEVVYYPRGSTPEFCVKASLVRDAMKVQWCSGMRFKMPFETEDSSRISWFMGTISSLQVADPIHWPDSPWRLLQVVWDEPDLLQNVKCVNPWLVELVPNIPTYTHHLSPFSPPRKKPRFLQNPEFNHINQIPMPAFSSNLLISHTTNNSLCNIQDNNSICADIQGARHAQFGLSPFDSPFNKLPSQSLHLPLRPPCGPNNKRSTTKNNLDISCLLTIGIGNSGHNLKDLTNEVKSTPPHILLFGKLIHTEQKSSNSSFCANGNSSSEGTLQKTSNANSDGMASSALHQDSPTENSSDGGSPWYKDQHKSDLRTENVNLLCLAL* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2707 589 SUPERFAMILY DNA-binding pseudobarrel domain 103 228 IPR015300 -
Aev05g2707 589 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 557 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev05g2707 589 PANTHER AUXIN RESPONSE FACTOR 16 8 557 - -
Aev05g2707 589 Pfam Auxin response factor 257 340 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev05g2707 589 ProSiteProfiles B3 DNA-binding domain profile. 109 212 IPR003340 GO:0003677
Aev05g2707 589 SMART B3_2 109 212 IPR003340 GO:0003677
Aev05g2707 589 MobiDBLite consensus disorder prediction 522 574 - -
Aev05g2707 589 Gene3D - 106 212 IPR015300 -
Aev05g2707 589 MobiDBLite consensus disorder prediction 522 568 - -
Aev05g2707 589 Gene3D - 294 367 - -
Aev05g2707 589 Pfam B3 DNA binding domain 109 211 IPR003340 GO:0003677
Aev05g2707 589 CDD B3_DNA 108 210 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2707 Aev-Chr5 28414631 28417881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2707 8 575 B3 DNA Binding Superfamily AT4G30080 55.369 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev05g2707 B3 7e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2707 - - gmx:100803053 803.512