Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2699 ATGGAACATGGAAATCCCTCCTCTCAGAGTGGCCAACAAGAACAAGCAAAATCAGGGTCAAATGTGATCCAAGCTGCTGGGGAATCGTCGACAAAGAAAGGGGCTGGAACTGAAAACAATGGAAACAACAACCGAGACAAGAATCAACCTTTACCAATTTCAAAAGTGACAAAGATCATGCGAGATGTTCTCCCAGAGAACGCAAGGATTTCTGACGAGGCTAAGGAAACAATCCAAAATTGCGTGTCAGAGTACATCAGCTTCATAACCAGTGAGGCCAACGAACATTGCCTCAGTGAACATCGCAAAACAGTAACTGCTGAGGACTTAATCTTTGCCCTCAAAAGTCTCGGCTTTGAAGACTATGTTCAGCCTCTTACTCTTTATCTTCACCGTTACCGTTACTTTGAGGGTGATTCCTCAAAGTGA 429 0.4406 MEHGNPSSQSGQQEQAKSGSNVIQAAGESSTKKGAGTENNGNNNRDKNQPLPISKVTKIMRDVLPENARISDEAKETIQNCVSEYISFITSEANEHCLSEHRKTVTAEDLIFALKSLGFEDYVQPLTLYLHRYRYFEGDSSK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2699 142 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 51 114 IPR003958 -
Aev05g2699 142 MobiDBLite consensus disorder prediction 1 51 - -
Aev05g2699 142 Gene3D Histone, subunit A 37 142 IPR009072 GO:0046982
Aev05g2699 142 SUPERFAMILY Histone-fold 50 139 IPR009072 GO:0046982
Aev05g2699 142 MobiDBLite consensus disorder prediction 1 54 - -
Aev05g2699 142 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 18 138 - -
Aev05g2699 142 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Aev05g2699 142 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Aev05g2699 142 PRINTS CCAAT-binding transcription factor subunit A signature 116 134 - -
Aev05g2699 142 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 18 138 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2699 Aev-Chr5 28376981 28379184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2699 45 139 CCAAT-HAP3 Transcription Factor Family AT5G47670 62.105 1.61e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev05g2699 CBFD_NFYB_HMF 5.9e-23 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2699 K08065 - tcc:18593281 141.354