Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2692 ATGGATCAAGAAGAGAGCCTATGTTCTAATGCTTGGACTCGGCCGGCTTCCTTAACCTCTCCTGGGAATGGGTTACAGACAAATCTGTCCTCTGATCCTCCCTCTTTCCCAGGTTTTGGTTTGCAGCAAAATCCACAAAAATGGAATGATCCCTCTATTTCAGGTTATGGAGTAAGGATAGAGTCACTTTTCAAAGAAGTCAACCAACCCTCACAAACCCAGTCTATGTTTTCATGCAACTCCAACAATGAAACCAAGATCGCTGATCAAGAAAACTGTCCACCGAGTGAGTCATCTCAAACCCTTAAACTCCAAAATTGGGATCCTAATGTGATGTTGAGTAACCTTTCCTTCTTGGAAGAAAAGATTCATCAACTTCAGGGTCTAGTGCACTTGATTGTTAGTAAAAAAGAACAGCCTTTTGGACAACCTGATGAACCCGTAACTAAGGAACAACAGCTCATCACTGCTGATCTTACATCAATTATTGTTCAGTTGATCTCTACTGCAGGTAGTCTTCTCCCTTCTGCTAGGCATACCCTTACCAACACTAGCCCATTAGTTAGACAGCTTTGCCAGCTTCAGGGGATTACTGTTCCTTCTGGGTCAGACCCTAATAACAGCTGCATTCAACCACAAAATAATAAGGCAAATAAATTGTCTGACCAGTCCCTGCAGAATGATCTACCTAATAACTGTGAAATGGAGCCAAAGTACAAGATGGAAGAACATGAGCTGAAAGATGATGATGATGCAGATGATGGTGAAAACCTCCCACCTGGTTCCTATGAGATTCTACAATTAGAAAAAGAAGAAATCCTCGCGCCGCATACGCATTTCTGTACAATTTGTGGGAAGGGATTCAAGAGAGATGCTAATCTTCGAATGCACATGCGAGGCCATGGTGACGAGTACAAAACCCCTGCTGCACTTGCGAAACCACATAAAGAATCTGGGTCTGAACAAAAGCTTATCAAGAGGTATTCCTGCCCATACACTGGCTGCAAGCGTAATAAAGATCACAAGAAGTTCCAACCTCTGAAGACTATTTTGTGTGTCAAAAATCATTATAAAAGAACACATTGTGATAAGAGTTACACTTGCAGCAGATGCCATATCAAGAAGTTTTCGGTTGTTGCAGATCTGAAAACTCATGAAAAACACTGTGGTAGGGATAAATGGCTCTGTTCATGTGGCACAACATTTTCAAGGAAAGACAAGCTTTTTGGACACATTGCTCTTTTTCAAGGTCATACACCAGCCATTCCCCTGGAAGACACTAAAGGACCGGCTGGCCCGCCAGATCTTGACAGCAATAAAATTAGTAAGGGAGGAAGTATGAACTTCAGTTTTGGATTAACTAATTCCGGTGAGGATGGAGTTCAAAATGCCATGGGTGTAAAAGGCAGTGTTGATGATCCTATCAATTATTTCTCACCATTTGAAGCTAATTTTGTTGGCTTTAATGAATTCACTCAACCACAATTTGAAGACTCAGAAGAAGGCTCTTTCTCTTTTCTCATCCCGGCATCTTTCAAACCTGGTGGAGAATCAAGTTCTGATAATCTTTTGTGA 1575 0.4165 MDQEESLCSNAWTRPASLTSPGNGLQTNLSSDPPSFPGFGLQQNPQKWNDPSISGYGVRIESLFKEVNQPSQTQSMFSCNSNNETKIADQENCPPSESSQTLKLQNWDPNVMLSNLSFLEEKIHQLQGLVHLIVSKKEQPFGQPDEPVTKEQQLITADLTSIIVQLISTAGSLLPSARHTLTNTSPLVRQLCQLQGITVPSGSDPNNSCIQPQNNKANKLSDQSLQNDLPNNCEMEPKYKMEEHELKDDDDADDGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKESGSEQKLIKRYSCPYTGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSYTCSRCHIKKFSVVADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEDTKGPAGPPDLDSNKISKGGSMNFSFGLTNSGEDGVQNAMGVKGSVDDPINYFSPFEANFVGFNEFTQPQFEDSEEGSFSFLIPASFKPGGESSSDNLL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2692 524 MobiDBLite consensus disorder prediction 202 231 - -
Aev05g2692 524 MobiDBLite consensus disorder prediction 1 47 - -
Aev05g2692 524 SMART c2h2final6 366 388 IPR013087 -
Aev05g2692 524 SMART c2h2final6 279 301 IPR013087 -
Aev05g2692 524 SMART c2h2final6 328 361 IPR013087 -
Aev05g2692 524 ProSitePatterns Zinc finger C2H2 type domain signature. 281 301 IPR013087 -
Aev05g2692 524 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 32 511 - -
Aev05g2692 524 MobiDBLite consensus disorder prediction 202 233 - -
Aev05g2692 524 ProSiteProfiles Zinc finger C2H2 type domain profile. 279 306 IPR013087 -
Aev05g2692 524 SUPERFAMILY beta-beta-alpha zinc fingers 277 304 IPR036236 -
Aev05g2692 524 Gene3D Classic Zinc Finger 263 337 - -
Aev05g2692 524 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 32 511 IPR044300 GO:0010044|GO:0010447
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2692 Aev-Chr5 28317362 28318936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2692 246 524 C2H2 Transcription Factor Family AT1G34370 67.568 1.01e-129 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev05g2692 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2692 - - gmx:100500526 759.985