Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2685 ATGAATAGTACTCATCATGTTCCTCCCGGTTTTAGATTCCATCCCACAGATGAAGAGCTTGTTGACTACTATCTGAGGAGGAAAGTCAATTCAACTAGAATTGACCTTGATGTCATCAAAGATGTTGACCTCTATAAAATTGAACCTTGGGATCTTCAAGAGGTTTGCAGAGTGGGAAGAGAAGAGGAAAATGAGTGGTACTTCTTTAGCCATAAAGATAAGAAATATCCAACAGGGACACGCACAAATAGAGCAACAGCAGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAAGCAATATATTCGAATTCGAATTCGAATGCAAAGCATGAGTTGATAGGAATGAGGAAAACCTTAGTGTTCTATAAAGGTCGAGCCCCAAATGGACTCAAATCAGATTGGATTATGCACGAGTATCGCCTTGAAACTGACGAAAACAACGATCACTACTTTGTTGACTCCTCTTCCTCTTCTTCTTCATCAAAGCAAATCATCCCTCACCACCCTCCTCCTCCTCCTCCCAATTATAATTATAATAATAACAATTTGTTCCTCTACCACCACCAACAACAACAACAAGAACAGATGCCATTTCCTAATTGCAACAAGAAATTATTAGAGGTGCAGCCAGCAGCAGATCATCACTTTCTTCATCAACATCAGCTTCCACTTCTGGACAACCACAACCCTAATAAACTGCTTCCATATGATCCTGCTTCGATGATACTTGTACAACCACAACATGATCAGGACGCACTTGTGTTTGGAAACAACAACAACACAAGTGGTGAACAATCTTCATCATCAGTAGTTGCTGCTGATTGGAGAGTTCTTGACAAGTTTGTCTCTTCACAACTTATTAGTCAACAAGAAGATCATCTATTGCCTCCTCCTCCTCAAACTAATACCTTGGGCGCGGTCTCCTTCAACGCCGAATCAGTTTCACCGGTTTCGCCACCGTCACCAGCTTCATCGGCGTCGCCACCTTCATCGCATTCATCTGCTCCACGTACTTGTAAGAGCATTGAAGCCTTGGGAGTGGCTTTGGGAGGAAGTCAAGAGCAATTGGGTGCGGTTCTTGCAAACATGGGATTCAAAGATGAAGATGTAGTGCTGGCTGCGATGAAGCTTGTGGAAAATCCCCTCATGGGACTTTCTGGAGTTTGA 1167 0.4293 MNSTHHVPPGFRFHPTDEELVDYYLRRKVNSTRIDLDVIKDVDLYKIEPWDLQEVCRVGREEENEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSNSNSNAKHELIGMRKTLVFYKGRAPNGLKSDWIMHEYRLETDENNDHYFVDSSSSSSSSKQIIPHHPPPPPPNYNYNNNNLFLYHHQQQQQEQMPFPNCNKKLLEVQPAADHHFLHQHQLPLLDNHNPNKLLPYDPASMILVQPQHDQDALVFGNNNNTSGEQSSSSVVAADWRVLDKFVSSQLISQQEDHLLPPPPQTNTLGAVSFNAESVSPVSPPSPASSASPPSSHSSAPRTCKSIEALGVALGGSQEQLGAVLANMGFKDEDVVLAAMKLVENPLMGLSGV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2685 388 MobiDBLite consensus disorder prediction 150 172 - -
Aev05g2685 388 MobiDBLite consensus disorder prediction 312 337 - -
Aev05g2685 388 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Aev05g2685 388 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 146 - -
Aev05g2685 388 SUPERFAMILY NAC domain 5 152 IPR036093 GO:0003677|GO:0006355
Aev05g2685 388 Gene3D NAC domain 16 196 IPR036093 GO:0003677|GO:0006355
Aev05g2685 388 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 159 291 - -
Aev05g2685 388 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 159 291 - -
Aev05g2685 388 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 146 - -
Aev05g2685 388 MobiDBLite consensus disorder prediction 150 164 - -
Aev05g2685 388 Pfam No apical meristem (NAM) protein 8 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2685 Aev-Chr5 28220269 28225992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2685 1 290 NAC Transcription Factor Family AT1G12260 50.327 2.81e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev05g2685 NAM 3.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2685 - - aip:107645037 286.96