LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev05g2684	ATGGGAAACATATTCCTCACACTATTATTCATATCTTCAATTTTGTCAATAGCCTCATCATCAAGAAGAGGACCAATACCATCCTCCAGCAACATAGATTGGTGGTGCAACCTTACCCCACACCCTGAGCCATGCAAATACTATATGACCCAAATCAGCAAGCATCACACAATCAAACACAAAACCGAGTTCAGGGCAGTGCTTATTCAATTGGCATTAAATCAGGCAAGTATCTTGCAAAAGGAAGCACAAGAGTTTGAGCAGAACATGGTGACAAAGCATCACAAAGCTGTGCATAGTGATTGTTTAAAGCTCTATGAGAACACAATCTTCCATCTCAACCGTACCCTTGAAGGGCTCAATGAGAATAATAATAACAACAAATGTTCACCAGTTGATGCACAGACATGGCTCAGCACTGCCCTCACAAACATCGAAACGTGTCGAGCCGGGGCAGAGGAACTGAGTGTTGAAGACTTCAATGTGCCATCTGTGAGCACCAATGTGACTGAGATGATAAGGAACAGCTTAGCCATCAACTTGGATTTGGTAAAGCTGATGAAACATAACAGCAACAATGCACATGATCATGATGAAACAGAGGAAGGTGGTTTTCCAAGGTGGTTTTCTGGGCATGAGAGGAAGCTGTTGGAGGCTACAACGATAAAAGCGCACCTTGTGGTGGCTAAAGACGGTTCAGGGCATTTCAGGACAGTCCAAGGGGCACTTGATGCAGCAGCAAAGAGAAGCGTGAAGACAAGGTTTATCATACATGTGAAGAAAGGGGTTTATAGAGAGAACATTGAGGTTGCTAACAACAATGATAACATCATGCTTGTTGGTGATGGGATCAGAAATACCATAATAACAAGTAGCAGAAGTATTCAAGATGGCTACACCACATATAGCTCTGCAACAGCTGGTTAG	927	0.4304	MGNIFLTLLFISSILSIASSSRRGPIPSSSNIDWWCNLTPHPEPCKYYMTQISKHHTIKHKTEFRAVLIQLALNQASILQKEAQEFEQNMVTKHHKAVHSDCLKLYENTIFHLNRTLEGLNENNNNNKCSPVDAQTWLSTALTNIETCRAGAEELSVEDFNVPSVSTNVTEMIRNSLAINLDLVKLMKHNSNNAHDHDETEEGGFPRWFSGHERKLLEATTIKAHLVVAKDGSGHFRTVQGALDAAAKRSVKTRFIIHVKKGVYRENIEVANNNDNIMLVGDGIRNTIITSSRSIQDGYTTYSSATAG*	309

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev05g2684	308	Coils	Coil	69	89	-	-
	Aev05g2684	308	SMART	PMEI_2	27	179	IPR006501	GO:0004857
	Aev05g2684	308	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	5	181	IPR006501	GO:0004857
	Aev05g2684	308	PANTHER	PECTINESTERASE	2	308	-	-
	Aev05g2684	308	Pfam	Pectinesterase	226	306	IPR000070	GO:0030599\|GO:0042545
	Aev05g2684	308	Gene3D	-	219	308	IPR012334	-
	Aev05g2684	308	PANTHER	PECTINESTERASE	2	308	-	-
	Aev05g2684	308	SUPERFAMILY	Pectin lyase-like	220	306	IPR011050	-
	Aev05g2684	308	Coils	Coil	103	123	-	-
	Aev05g2684	308	Pfam	Plant invertase/pectin methylesterase inhibitor	31	179	IPR006501	GO:0004857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev05g2684	Aev-Chr5	28213938	28214864	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev05g2684	29	308	Carbohydrate Esterase	AT3G47400	49.481	1.30e-91	282

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev05g2684	K01051		-	gmx:100806133	363.614

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