Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2676 ATGGCTTCAAATTCGGAAAAGGATATTCCTGCTGCAGATGACCAAGCTGGTACAGCAGAGAATACAATTCCCAAAGATGAAACATCCTCTGCAGAGTCACAGGCTGGAAGAAGAGCTGCTTCTGGACCTGCAACGGGGATTCCAGCGAATCCTTTCGATTTCTCGGCAATGTCTGGTCTTCTCAATGATCCGAGTATCAAAGAATTGGCTGAACAGATAGCAAAAGACCCATCATTCAATCAGATGGCTGAGCAGCTTCAGAAGACTTTTCAAGGGGCAGCACAGGATGGTGTCCCTAACTTTGATAATCAGCAATATTATTCTACCATGCAACAAGTTATGCAGAATCCTAATTTTATGACCATGGCGGAGCGCCTGGGTAATGCATTGATGCAGGATCCATCTATGTCTGCCATGCTTGAAAGTTTTACGAATCCAACAAATAAAGAGCAGCTTGAAGAGAGAATGGCACGCATCAAGGAAGATCCATCTTTGAAACATATTTTAGATGAGATAGAGACTGGTGGTCCCTCTGCTATGATGAGATACTGGAATGACGAGGAGGTTTTGCGGAAGTTAGGACAAGCCATGGGCATTGCAACTTCTGCAGATGCAGCTTGTTCAGCTGAAAATTCCGGGGCAGATGAGACTGAAGATGTGGGAAATGAAGATGAATCAATTGTTCATCACACTGCTAGTATTGGTGATGTGGAGGGGTTGAAAAAAGCACTAGCCTCTGGTGCTGACAAGGATGAAGAGGATTCAGAAGGAAGAACTGCTTTGCATTTTTCATGTGGATATGGAGAGGTGAAGTGTGCGCAAGTACTGATTGAGGCTGGCGCAAAAGTTGATGCATTGGACAAGAATAAGAACACAGCTCTTCATTATGCAGCTGGTTATGGAAGGAAAGAGTGTGTGGCCCTTCTCCTTGAAAATGGCGCTGCAGTTACTCTGCAGAACATGGACGGGAAAACTCCTATAGAGGGTTTTGCTTTCGTTTTGTTTTCTGTTTCTTCATCTTCCTCATATACCTCACCCACTCAATCCCAATCAGCTACCATGGCTTCAAATTCGCAAAAGGACATTCCTGCTGAAAACGGAAACATAAGCGATTCGGACACAAATTCCGGCGACGATTCGCCGGAGTACTACCAGCCGATCTCCGTCGATGACGATGGCGAATCCGACGGCGAAAACGGCGTTGAGCTCCGCCAGCTTCCGAATGGTTACTATCTGCATCACGATGTGGTTGAGAACGGTGTGTCGTCGCTGGATCTTAACGACGTGGTTGAGCAGAAGAGTAGCGATGATGAAAATGAAGAGGAGGAAGAAGAAGAGATGAACAGAGAGGCGATTCGGAGAGCGTTCACTGAGGACGAGAACCGGAGGAACGCGCCACTGACGGCGGAGAACGCGGCGCGCGTGATGGAGGCGATGCGAACGGTATCGTTTGGCAGTGTAGCTCCCGATTGGGCTGCTCAGGTTCCTGAGGATCGGTGGATCGATCAACTTCGTAGATTGAGACAGTCACCAAGCACTTGA 1542 0.4747 MASNSEKDIPAADDQAGTAENTIPKDETSSAESQAGRRAASGPATGIPANPFDFSAMSGLLNDPSIKELAEQIAKDPSFNQMAEQLQKTFQGAAQDGVPNFDNQQYYSTMQQVMQNPNFMTMAERLGNALMQDPSMSAMLESFTNPTNKEQLEERMARIKEDPSLKHILDEIETGGPSAMMRYWNDEEVLRKLGQAMGIATSADAACSAENSGADETEDVGNEDESIVHHTASIGDVEGLKKALASGADKDEEDSEGRTALHFSCGYGEVKCAQVLIEAGAKVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIEGFAFVLFSVSSSSSYTSPTQSQSATMASNSQKDIPAENGNISDSDTNSGDDSPEYYQPISVDDDGESDGENGVELRQLPNGYYLHHDVVENGVSSLDLNDVVEQKSSDDENEEEEEEEMNREAIRRAFTEDENRRNAPLTAENAARVMEAMRTVSFGSVAPDWAAQVPEDRWIDQLRRLRQSPST* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2676 513 ProSiteProfiles Ankyrin repeat region circular profile. 256 288 - -
Aev05g2676 513 Pfam STI1 domain 154 198 IPR041243 -
Aev05g2676 513 Coils Coil 430 450 - -
Aev05g2676 513 ProSiteProfiles Ankyrin repeat region circular profile. 289 320 - -
Aev05g2676 513 MobiDBLite consensus disorder prediction 21 36 - -
Aev05g2676 513 Pfam Ankyrin repeats (3 copies) 230 320 IPR002110 GO:0005515
Aev05g2676 513 Pfam Male enhanced antigen 1 (MEA1) 382 506 - -
Aev05g2676 513 MobiDBLite consensus disorder prediction 1 50 - -
Aev05g2676 513 Gene3D - 216 293 IPR036770 -
Aev05g2676 513 PANTHER - 39 328 - -
Aev05g2676 513 ProSiteProfiles Ankyrin repeat profile. 256 288 IPR002110 GO:0005515
Aev05g2676 513 SMART ANK_2a 289 318 IPR002110 GO:0005515
Aev05g2676 513 SMART ANK_2a 223 252 IPR002110 GO:0005515
Aev05g2676 513 SMART ANK_2a 256 285 IPR002110 GO:0005515
Aev05g2676 513 SUPERFAMILY Ankyrin repeat 216 328 IPR036770 -
Aev05g2676 513 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 39 328 - -
Aev05g2676 513 Gene3D - 294 331 IPR036770 -
Aev05g2676 513 MobiDBLite consensus disorder prediction 344 382 - -
Aev05g2676 513 ProSiteProfiles Ankyrin repeat profile. 289 321 IPR002110 GO:0005515
Aev05g2676 513 MobiDBLite consensus disorder prediction 344 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2676 Aev-Chr5 28139139 28145085 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2676 365 510 Chloroplast and Mitochondria Gene Families AT1G07020 48.026 1.09e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2676 - - gmx:100797622 576.244