LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev05g2671	ATGGCTGGGATTGATGATAATGTTGCTCTCCCCGGCGATTGGGGTGCTCCTAGCCCCAGTCCAAGAACATTTTTTTCTAGATTGCTTGGTGAAGATGCCATCACAAGATCAATCCCAGAGCCTCCTGGAAGTGGTGGAGCCGGGGATCTCTTTTTGGGAACTCATGAGCCTGGTCAGACGCAGACAGGGAAAGGGAACGCCGAAGACGGTGCACACGATGGCAATTCAGGTGCCCAGCTGACTGACACATGTTTCTCGGCCGATCACAAGTCGGGCGCGCGGGGAGGCCTCGTTGAAAGAATTGCTGCTAGAGCTGGGTTTAATGCCCCAAGGTTGAACACAGAAAGCATTAGATCTACTGACCTTTCACTTAATACTGATGTTCAGTCTCCTTACTTGACCATACCACCTGGTCTTAGTCCTACCACACTTTTAGATTCTCCAGTTTTCCTTGCAAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTTCCATTCATCACAAACGGCAACATCCGCAGCTCTGAATTATTACCTGATGCTCGTGAAAGATGTAAAGATAATGGATTTGATGATATCTATGCATCATCGTTTGCTTTCAAGCCTGCAATGGATTCGGGGTCCTCTTTTTATCATGGTGTTGCAAGAAAAATTAATTCGACTACAGTTCCTCAACAATCGCTTCCTGGCATTGAGGTCCCAGTTCAGTCAGAAAATTCTTTTCATTCTCAAAGTGCCGATGCAATCAAATCTCAAACTGAGAATAAAAGTGGCCTCCAACTTCAGGCAGACTTTATTGAGTCGCCCCCTCAGAATGATAATGGAACTAAAAACTTATCTGCTGATACTATCGGTGGTAGCATTGAACGTTCTACACCACTTGATGAACAAGCAGATGAGGAGGGAGATCAAAGGGGGATTGGAGATTCTATGGCTGCTGGTGTTGGTGGTGCACCATCTGACGATGGATATAACTGGAGGAAATATGGCCAGAAGCAAGTAAAGGGTAGCGAGTACCCACGAAGTTACTACAAGTGTACACATCCAAATTGCCAGGTTAAGAAGAAAGTAGAACGATCTCACGAGGGCCACATAACAGAGATCATCTATAAGGGAGAACACAACCATCCAAAACCTCCTCCAAATCGCCGGTCAGGCGCATCAGTTAACCCCCGTACTGACATGCAAGTGGACAACCCTGAACATCTTGAACCGCAGAGTGGGGGTGATGGTGACCTGGGTTGGGCTAATGTACAGAAGGGAAATATAGCCGGAGCTGCCAACTGGAAGCATGACAACCTTGAAGTGACATCATCATCTGTTGGCCCCGAATACTGCAACCAATCCGCCAATTTGCAGGCTCAAAATGGTACTCAATTTGATTCAGGGGATGCTGTGGATGCCTCATCAACTTTTTCTAACGAAGAAGATGAAGATGATCGAGGTACTCATGGCAGTGTGTCATTAGGTTATGATGGGGAAGGAGATGAATTGGAGTCTAAAAGAAGGAAACTGGAATCATATGCAACCGAGATGAGTGGCGCTACCAGAGCTATTCGTGAGCCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTTGATGATGGTTATCGGTGGCGGAAATACGGGCAGAAGGTTGTCAAAGGAAATCCTAACCCGAGGAGTTACTACAAGTGCACGAATGCAGGCTGCACGGTGAGGAAGCATGTTGAGAGAGCATCACATGACCTCAAATCTGTGATCACTACGTACGAGGGCAAGCACAACCATGACGTTCCTGCTGCGCGCACTAGCAGCCATGTCAATGCCAATGCTTCCGGTGGTGTTACCGGGCAAGTTCCTGCTGTTCTGCAGACCCATGTTCATAGACCTGAACCGTCCCAAATTCACAATGGCATTGGAAGGCTTGAGAGGCCTACCCTCGGCTCGTTCAACCTACCTGGTAGGCAGCAGCTAGGACCCCCCCACGGCTTCTCCTTCGGCATGAATCAACCGCTTCTGCCAAATTTGGCAATGCCAGGACTGGGACCGGGACATCCAAAGCTCCCTATGATGCCGGTTCATCCATTCTTGGCGCATCAACGCCCTCAAAATGAAATGGGGTTCATGTTGCCAAAGGGAGAACCAAATGTGGAGCCTATTCCTGTGCCTAGTGGTTCATATCAAGAACTCATCAGTCGCATGCCTCTTGGACCTCATATGTGA	2214	0.4806	MAGIDDNVALPGDWGAPSPSPRTFFSRLLGEDAITRSIPEPPGSGGAGDLFLGTHEPGQTQTGKGNAEDGAHDGNSGAQLTDTCFSADHKSGARGGLVERIAARAGFNAPRLNTESIRSTDLSLNTDVQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFPFITNGNIRSSELLPDARERCKDNGFDDIYASSFAFKPAMDSGSSFYHGVARKINSTTVPQQSLPGIEVPVQSENSFHSQSADAIKSQTENKSGLQLQADFIESPPQNDNGTKNLSADTIGGSIERSTPLDEQADEEGDQRGIGDSMAAGVGGAPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGEHNHPKPPPNRRSGASVNPRTDMQVDNPEHLEPQSGGDGDLGWANVQKGNIAGAANWKHDNLEVTSSSVGPEYCNQSANLQAQNGTQFDSGDAVDASSTFSNEEDEDDRGTHGSVSLGYDGEGDELESKRRKLESYATEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARTSSHVNANASGGVTGQVPAVLQTHVHRPEPSQIHNGIGRLERPTLGSFNLPGRQQLGPPHGFSFGMNQPLLPNLAMPGLGPGHPKLPMMPVHPFLAHQRPQNEMGFMLPKGEPNVEPIPVPSGSYQELISRMPLGPHM*	738

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev05g2671	737	MobiDBLite	consensus disorder prediction	370	418	-	-
	Aev05g2671	737	Pfam	WRKY DNA -binding domain	322	378	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	Pfam	WRKY DNA -binding domain	537	593	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	108	672	IPR044810	GO:0003700
	Aev05g2671	737	SUPERFAMILY	WRKY DNA-binding domain	320	380	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	ProSiteProfiles	WRKY domain profile.	322	380	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	SMART	WRKY_cls	321	379	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	SMART	WRKY_cls	536	595	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	Gene3D	WRKY domain	523	589	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	SUPERFAMILY	WRKY DNA-binding domain	528	596	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	Gene3D	WRKY domain	313	381	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	ProSiteProfiles	WRKY domain profile.	531	596	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev05g2671	737	PANTHER	WRKY TRANSCRIPTION FACTOR 2-RELATED	108	672	-	-
	Aev05g2671	737	MobiDBLite	consensus disorder prediction	238	288	-	-
	Aev05g2671	737	MobiDBLite	consensus disorder prediction	458	502	-	-
	Aev05g2671	737	MobiDBLite	consensus disorder prediction	238	327	-	-
	Aev05g2671	737	MobiDBLite	consensus disorder prediction	1	76	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev05g2671	Aev-Chr5	28102058	28104931	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev05g2671	1	732	WRKY Transcription Factor Family	AT5G56270	52.243	0.0	600

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Aev05g2671		WRKY	3.7e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev05g2671	K18835		-	gmx:100796545	1180.24