Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2647 ATGGAAGTCTCAGGGGATGTTGGTTTGAGTACATTTGAAGTTCAGATGCATCAACAAACATATGAAGTGGCTCCAGATGATGGGTGTAGAATGCTGGAGAGTTCATCTGGTATCTGTGAGGATGATGCTATTCTTGAGCCATGTGAAGGCATGGAATTTGAATCTGAAGATGCTGCTAAGATATTCTATGATGAATATGCTCGACGTCTAGGATTTGTCATGCGTGTGATGTCTTGTCGCCGCTCTGAGAGAGATGGCAGGATTCTTGCCCGCAGGCTTGGATGTAATAAGGAGGGTTACCGTTCCGGAAATAGTATCCGAGGGAAATATGGGCCAAGTCGTAAGCCAAGGGCGAGCACAAGGGAAGGTTGTAAGGCAATGATCCATGTCAAGTATGATAAGTCTGGAAAATGGGTGATAACAAAGTTTGTAAAAGATCATAATCATCCACTAGTAGTCTCTCCACGTGAAGCTCGCCAAACAATAATGGATGACAAGGATAAGAAGATTCAGGAGCTAACAGCAGAGCTTCGCAATAAAAAACGGTTGTGTGCAATATATCAAGAACAGTTAGCTCACTTTATGAAAATTGTTGAAGAGCACTGTGACAAGCTGTCTGTGAAAATTAGTCATGTTGTTAATAACGTCAAAGAATTTGAATCCATAGAAGAGCTTTTGCACAAGACGTAG 690 0.4203 MEVSGDVGLSTFEVQMHQQTYEVAPDDGCRMLESSSGICEDDAILEPCEGMEFESEDAAKIFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYRSGNSIRGKYGPSRKPRASTREGCKAMIHVKYDKSGKWVITKFVKDHNHPLVVSPREARQTIMDDKDKKIQELTAELRNKKRLCAIYQEQLAHFMKIVEEHCDKLSVKISHVVNNVKEFESIEELLHKT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2647 229 Coils Coil 163 190 - -
Aev05g2647 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 20 228 - -
Aev05g2647 229 Pfam FAR1 DNA-binding domain 62 152 IPR004330 -
Aev05g2647 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2647 Aev-Chr5 27930450 27931847 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev05g2647 FAR1 1.2e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2647 - - gmx:100787741 385.185