Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2608 ATGGCGGCAGCGAAACCTCAGAGGACTCCACAGGAAGTGGAGGACATAATCATCCGCAAAATCTTCCTCGTTTCGGTCACCGATTCCGAAGCAAGCAACGCCGATTCAAGAATCGTGTACCTTGAATTAACGGCAGCGGAGATTCTCAGCGAAGGAAAAGACCTCCGTCTCTCTCGCGATTTGATGGAGAGGGTTCTCATCGATCGCCTCTCCGGCGATTTCCCCGGCACCGGCTCCGGAGAATCGCCGTTCCAGTACCTCCTCGGCTGCTACCACCGCGCGCACGAGGAGTCGAAGAAAATCGCCAACATGAAAGACAAAACCCTAAGGTCCGAGATGGAATCGGTGGTGAAACAGGCCAAGAAGCTCTGCGTCTCGTACTGCAGGATCCACCTGGCCAATCCAGAACTGTTCCCGAACCGCAATCCTTCCTCCGGCCCGGGCTCTGCGGCGGCATCGCCAGTGCTGCCGCTGATCTTCGCCGAAGTCGGTGGCGGCATTGACGCCTTCGGCGGCACCAGCGGAGGCGGCGGAGGGGTGAAGAGTCCTCCGGGGTTCCTGGAGGAGTTCTTCAGGGACTCGGATTTTGACAGCCTGGACCCAATTCTGAAGGGACTGTATGAGGAATTGAGAGGGAGTGTGATGAAGGTTTCTGCTCTTGGGAACTTTCAGGATTCTCTGAGAGCTTTGCTTTACTTGGTGAGGTTCCCAATTGGTGCTAAGTCACTTGTGAATCATGAATGGTGGATCCCAAAAGGGGTTTACATGAATGGGCGTGCCATTGAGATGACAAGCATTTTGGGTCCATTCTTTCATGTCAGTGCTCTCTCTGATCAAACCTTCTTCAGGAGCCATCCTGATGTTGGGCAGCAATGCTTTTCTGATGCATCAACTCGACGACCGTCTGATTTACTATCATCATTCTCCACTATCAAAACTGTCATGAACAACCTATACGATGGCCTATATGAAGTTCTCTTCATTCTCCTGAAAAGTAAAGATACTCGTGAAAAGGTACTAGAGTATCTTGCGGAGGTGATCAATTTAAATGCATCCAGGGCTCATATACAGGTTGATCCTATAACTTGTGCAAGTTCAGGCATGTTTGTGAATCTGAGTGCTGTCATGCTTCGTCTCTGTGAGCCATTTTTGGATGCAAATTTAACCAAAAGGGATAAAATTGATCCAAAATATGTACATGACTCAAACCGTTTGAAACTAAGTGGGTTGACTGCTCTTCATGCATCATCAGAAGAAGTTACTGAATGGCTTAATAGTAATAAACGGGCTAAGGCTGGTGAAAATAATCAAAGTAATGATGATCAGAAACGCTTGCAGCAATCTCAAGAGGCTAGTAGTTCTGGTAGTATTAGTACTGGTGAGCTTTCAAATGAAAACTCTGGACATGGTGAAAAGACGGAATATCATTTTATTTGCGAATGCTTCTTTATGACTGCAAGAGTGCTCAACTTGGGCCTTTTAAAAGCATTTTCTGACTTCAAACACTTAGTTCAGGATATTTCTAGATGTGAAGATGCTCTTTCAACATTCAAAGCCATGCAGGAGCGGTCTCCCACTCCTCAGTTAGAATTGGATATATCTCGACTTGAGAAAGAACTGGAATCATACTCACAGGAAAAGCTTTGTTATGAAGCTCAGATATTGAGGGATAATAATCTTATTCAGAATGCACTGTCCTTCTATCGCTTGATGATTGTTTGGTTGGTTGGCTTGGTTGGGGGATTTAAGATGCCATTACCATCGAATTGCCCAATGGAATTTGCTACTATGCCTGAGCATTTTGTAGAAGACGCCATGGAACTTCTAATATTTGCTTCCCGAATTCCAAAGGCCTTAGATGGAGTTGTGCTGGATGAGTTTATGAACTTCGTAATTATGTTCATGGCCAGCCCTAAATATATCAAAAACCCATATCTAAGGGCAAAGATGGTTGAAGTCTTGAACTGCTGGATGCCCCGTAGGAGCGGATCATCGGCTACAGCCACTCTATTTGAAGGGCACCAACTGTCTCTGGAGTATCTTGTGCGGAATCTTCTGAAACTTTATGTCGACATTGAGTTCACTGGTTCTCACACACAATTCTATGACAAATTTAACATCCGCCATAATATAGCCGAACTCCTTGAATACCTATGGCAGGTCCCTAGTCATCGCAATGCTTGGAGACAGATTGCTAAAGAAGAGGAAAAGGGCGTCTACCTCAATTTCTTAAACTTTTTGATTAATGATAGTATTTATCTTCTTGATGAAAGTCTGAACAAAATTCTTGAGCTAAAAGAATTGGAGGCTGAGATGTCAAATACGACAGAATGGGAGCAACGGCCTGTACAAGAGAGGCAGGAGAGGACCCGGTTATTCCATTCTCAAGAAAATATTATTCGGATAGATATGAAGTTGGCAAATGAAGATGTGAGCATGCTTGCATTTACGTCAGAGCAGATTACTGCTCCATTCCTACTTCCAGAGATGGTTGAAAGAGTGGCTAGCATGCTCAATTACTTTCTGCTGCAACTGGTGGGTCCCCAAAGAAAATCACTTAGTCTGAAAGATCCTGAGAAATATGAATTTCGTCCTAAGCATTTGCTTAAACAGATTGTGCACATATATGTTCATCTGGCTAGAGGTGATACCAATTCCATCTTCCCAGCTGCCATCTCCAAGGATGGTCGATCATACAATGATCAGTTGTTTAGTGCAGCAGCAGATGTCCTTCGTAGAATAGGTGAGGATGGGCGAATCATACAGGAATTTGCTCAACTTGGTGCTAAAGCAAAAGTTGCAGCTTCAGAGGCCATGGATACTGAAGCTACTCTTGGAGAAATACCAGATGAATTCCTTGATCCAATTCAATACACTTTGATGAAGGATCCAGTTATCTTACCTTCTTCAAGGATCACAGTTGATCGACCTGTCATTCAGAGGCATCTCCTTAGTGATAGTACTGACCCGTTCAACCGTTCTCATCTCACTGCGGATATGCTCATTCCTGACAATGAACTAAAAGCAAGAATTGAGGAGTTTGTCAGGTCTCAGGAAATGAAGAAACATAATGAAGGGCTAAGCGTACAGAGTACCAAGGACACGATCCAGACTACGAATGGGGAAATGTTGATCGACTAG 3141 0.4476 MAAAKPQRTPQEVEDIIIRKIFLVSVTDSEASNADSRIVYLELTAAEILSEGKDLRLSRDLMERVLIDRLSGDFPGTGSGESPFQYLLGCYHRAHEESKKIANMKDKTLRSEMESVVKQAKKLCVSYCRIHLANPELFPNRNPSSGPGSAAASPVLPLIFAEVGGGIDAFGGTSGGGGGVKSPPGFLEEFFRDSDFDSLDPILKGLYEELRGSVMKVSALGNFQDSLRALLYLVRFPIGAKSLVNHEWWIPKGVYMNGRAIEMTSILGPFFHVSALSDQTFFRSHPDVGQQCFSDASTRRPSDLLSSFSTIKTVMNNLYDGLYEVLFILLKSKDTREKVLEYLAEVINLNASRAHIQVDPITCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPKYVHDSNRLKLSGLTALHASSEEVTEWLNSNKRAKAGENNQSNDDQKRLQQSQEASSSGSISTGELSNENSGHGEKTEYHFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDALSTFKAMQERSPTPQLELDISRLEKELESYSQEKLCYEAQILRDNNLIQNALSFYRLMIVWLVGLVGGFKMPLPSNCPMEFATMPEHFVEDAMELLIFASRIPKALDGVVLDEFMNFVIMFMASPKYIKNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTTEWEQRPVQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVHIYVHLARGDTNSIFPAAISKDGRSYNDQLFSAAADVLRRIGEDGRIIQEFAQLGAKAKVAASEAMDTEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDNELKARIEEFVRSQEMKKHNEGLSVQSTKDTIQTTNGEMLID* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2608 1046 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 947 1026 IPR013083 -
Aev05g2608 1046 Pfam Ubiquitin elongating factor core 267 931 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Aev05g2608 1046 MobiDBLite consensus disorder prediction 1022 1046 - -
Aev05g2608 1046 MobiDBLite consensus disorder prediction 431 468 - -
Aev05g2608 1046 SMART Ubox_2 951 1014 IPR003613 GO:0004842|GO:0016567
Aev05g2608 1046 Pfam U-box domain 948 1019 IPR003613 GO:0004842|GO:0016567
Aev05g2608 1046 PANTHER UBIQUITINATION FACTOR E4 1 1023 IPR045132 GO:0000151|GO:0030433|GO:0034450
Aev05g2608 1046 CDD RING-Ubox_UBE4A 950 1018 - -
Aev05g2608 1046 SUPERFAMILY RING/U-box 940 1020 - -
Aev05g2608 1046 MobiDBLite consensus disorder prediction 1029 1046 - -
Aev05g2608 1046 MobiDBLite consensus disorder prediction 431 466 - -
Aev05g2608 1046 PANTHER - 1 1023 - -
Aev05g2608 1046 Coils Coil 526 553 - -
Aev05g2608 1046 ProSiteProfiles U-box domain profile. 947 1021 IPR003613 GO:0004842|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2608 1 1046 U-box Gene Family AT5G15400 76.163 0.0 1641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2608 K10597 - gmx:100806175 1799.25