Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2571 ATGATCAACAATAATCCAAAAGATTCAGATAATTTCCCACTGAAACAAGAAGGTCTTTCATCATCAAGCGGTCATCATCACCGCCACGAGAAAGCAAAGGCACCACCGCCGCCGCCACCACCATCATCATCATCGTCGCAATGGCTAAGATTAAAGGACCCAAGGATAGTGAGAGTCTCAAGAGCCTTTGGAGGGAAAGACAGGCACAGCAAGGTATGCACAATAAGAGGACTAAGAGATAGAAGGGTAAGGCTTTCAGTCCCAACAGCTATTAGCTTATATGATCTCCAAGATAGGTTAGGGCTAAGTCAACCTAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCCAAAAATGAAATTGATGAACTCCCTCCACTCCCAATAGTTCCTTCACTAATGGGGAACAATAACTTCACCCTTGGTTTTCCATCTCTTAATAATGATGTTAATTCTATTTGGAAACCAAAGTCTAAAGAAATGGTCAATGATGAAGAAAAAGAAGAAGATAATAAAGAAGGAGAAGGTGGTGGTGCACAAGATGTTTTGCCTAATAGTAACAATATTGTCTTACCTTCCTTCTTAGGTTTGGTGAACACTATGCCATTTGGTTACCAATGGGAGAATAATTCATCAACATCATCATCATCAGGTGATGTTGTTGCTACTCAATTGGGAAATCATCATCATCATCATCATAATCATCATATTGGTTCTTCAGATCACATGCATAGCATTAATGTGTTACCTTTTGCTTCAAATCTTGGTGGTTCTCAAATATTGGTGTGTCCTCCAACAACAACAACAACACAGTCATATTTCCCTTCACATAATAATAATCTTGCTGCTGCTGCAGCAATGGAAATGGATCCAAGGCAAATGATCAATACTCATTATCATCAATTGTTGATGAATTCAGTTAACCCTTCTCATCATCAACACCACCACCTCATGATGACTAGGATGACTCCCAAACTTTTCCATTCAGCTAATAACACCACTGAAAGCCAGTCACACCATAAAGACCAGGATTTTCCTTCCAAGTGA 1044 0.3985 MINNNPKDSDNFPLKQEGLSSSSGHHHRHEKAKAPPPPPPPSSSSSQWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAISLYDLQDRLGLSQPSKVVDWLLNAAKNEIDELPPLPIVPSLMGNNNFTLGFPSLNNDVNSIWKPKSKEMVNDEEKEEDNKEGEGGGAQDVLPNSNNIVLPSFLGLVNTMPFGYQWENNSSTSSSSGDVVATQLGNHHHHHHNHHIGSSDHMHSINVLPFASNLGGSQILVCPPTTTTTQSYFPSHNNNLAAAAAMEMDPRQMINTHYHQLLMNSVNPSHHQHHHLMMTRMTPKLFHSANNTTESQSHHKDQDFPSK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2571 347 MobiDBLite consensus disorder prediction 156 183 - -
Aev05g2571 347 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 11 340 - -
Aev05g2571 347 Pfam TCP family transcription factor 65 163 IPR017887 -
Aev05g2571 347 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g2571 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 340 IPR005333 GO:0003700
Aev05g2571 347 MobiDBLite consensus disorder prediction 157 175 - -
Aev05g2571 347 ProSiteProfiles TCP domain profile. 65 123 IPR017887 -
Aev05g2571 347 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2571 Aev-Chr5 27174056 27175099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2571 48 303 TCP Transcription Factor Family AT3G02150 44.765 4.86e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev05g2571 TCP 7.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2571 - - aprc:113867214 284.263