Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2555 ATGGCCGCATCCAATGCTCGCACCAACTCCTTTGGTCAAACCGAGATTAACTGGGACAAGCTAGATAAAACGAAGTTCTATGTTGTAGGAGCTGGACTCTTTACGGGTGTTACAGTGGCACTCTACCCAGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCTTCAAAGGATACTGTGGAGAGGAGTGCATTTTCTGTCGTGAAGGGATTACTTAAATCGGATGGCATCCCTGGTTTGTATAAAGGGTTTGGTACAGTTATTACTGGTGCAATTCCTGCCAGAATCATATTTCTCACTGCCTTAGAGACCACAAAGGTAGCTGCCTTCAGGATGCTTGAGCCATTTAAACTGTCTGAAACTACCCAGGCTGCCATAGCAAACGGAGTTGCAGGCATGACATCATCACTTTTATCACAAGCTGTGTTTGTTCCAATCGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGGCATGCACAATATAGTGGAGGGCTGGATGTTGCTCGCAAATTGATAAGATCTGATGGCATCAGGGGATTATATAGAGGGTTTGGTCTATCTGTTATGACTTATTCACCATCCAGTGCTGTCTGGTGGGCAAGTTATGGTTCGAGCCAACGTTTAATATGGAGAGTCTTGGGGCATGGTGTGGAATATGAAGGTACTCCTAGTCTGCACAAGATTGTATTAGTTCAGGCTGCTGGAGGGATTGTTGCTGGTGCAACTGCATCCTGCATCACAACCCCATTGGATACTATCAAGACACGGTTACAGGTGATGGGACATGAAAAGAGAATCTCTGTAAAACAAGTTGTTAAAGAATTAATCAATGAGGATGGTTGGAAAGGTTTATATAGAGGGCTGGGCCCAAGATTTTTCAGCATGTCAGCATGGGAATCTTGTTTGCTTGCATATTCTGGTCTGGTGTATTCAATTATTTAA 948 0.4409 MAASNARTNSFGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVASKDTVERSAFSVVKGLLKSDGIPGLYKGFGTVITGAIPARIIFLTALETTKVAAFRMLEPFKLSETTQAAIANGVAGMTSSLLSQAVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKLIRSDGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRLIWRVLGHGVEYEGTPSLHKIVLVQAAGGIVAGATASCITTPLDTIKTRLQVMGHEKRISVKQVVKELINEDGWKGLYRGLGPRFFSMSAWESCLLAYSGLVYSII* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2555 315 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 13 308 - -
Aev05g2555 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 229 314 IPR018108 -
Aev05g2555 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Aev05g2555 315 SUPERFAMILY Mitochondrial carrier 19 304 IPR023395 -
Aev05g2555 315 Gene3D Mitochondrial carrier domain 27 313 IPR023395 -
Aev05g2555 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Aev05g2555 315 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 13 308 - -
Aev05g2555 315 Pfam Mitochondrial carrier protein 124 212 IPR018108 -
Aev05g2555 315 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Aev05g2555 315 Pfam Mitochondrial carrier protein 233 305 IPR018108 -
Aev05g2555 315 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Aev05g2555 315 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Aev05g2555 315 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Aev05g2555 315 PRINTS Mitochondrial carrier protein signature 238 260 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2555 Aev-Chr5 27033127 27036965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2555 16 310 Chloroplast and Mitochondria Gene Families AT5G15640 77.926 1.75e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2555 K15121 - tcc:18601733 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2555 05 27033127 27036965 Aev06g3649 06 37096767 37099678 PCT