Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2554 ATGATGCCCTGTTTCGTGCCCGTGTTCCGATTCTTCACCAAACAGCGTCCATGCATGTTGCTCTTCTTGTTCATGTTGTCCTGCACTTGCTTCACTTCAACAGAAGCTTATGATGCACTTGACCCAAATGGAAATATCACAATCAAATGGGATATTATAAGTTGGACACCTGATGGTTATGTTGCTGTTGTTACGATGAACAATTTCCAACAATACCGCCATATCACAGCGCCGGGGTGGCAACTCGGATGGACGTGGGCAAAGAAGGAGGTAATATGGAGCATGATGGGAGGGCAAACTACCGAACAAGGGGATTGCTCGAAATTTAAGGGTAACATACCGCATTGCTGTAAGAAGGACCCAACTGTTGTGGATTTACTACCCGGAACACCTTACAATCAACAAATCCAGAATTGCTGCAAAGGTGGTGTGCTCAGTTCGTGGGCACAGGATCCAACCAACGCTGTCGCAGCATTTCAAGTCAGTGTGGGCAGAGCTGGAACCACTAACAAAACGGTCAAAGTGCCCAAAAACTTCACATTGAAAGCACCAGGACCAGGTTATACTTGTGGGCCGGCAAAAATTGTCAAACCCACCCAATTCATACAACCCGACCATAGGAGAGTGACTCAAGCACTCATGACATGGAATGTGACATGCTCATATTCACAGTTTCTAGCTCAGAAAACTCCCACTTGCTGTGTATCCCTCTCATCTTTCTATAATGATACTATTGTGCCCTGCCCGACATGTGCATGCGGCTGCCAGGGAAACTCTTCTCAGTCAGGGAACTGTATAGACCCAGATACGCCACATTTGGCATCGGTTGTTGCTAATCCGGGAAAGAATACACCTTTGGTTCAATGTACTCGTCATATGTGCCCAATCCGAGTTCACTGGCACGTCAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTGTCACTAATTTCAATTACAGGATGAATTATTCTGAATGGAACTTGGTTATTCAACACCCAAACTTTGACAATCTGACTCAACTTTTCAGTTTCAACTACAAGTCATTAACACCCTATGGATCAATAAATGATACGGGAATGCTATGGGGAGTTAAGTTCTACAATGACTTGCTCATGCAAGCTGGTCGTCTTGGTAATGTACAGTCAGAGCTACTTTTTCGAAAGGACAAATCGACTTTCACTTTTGACAAGGGTTGGGCTTTTCCTCGGAGGATCTATTTCAATGGCGACAACTGCGTGATGCCGCCACCTGATGCTTATCCGTGGTTACCGAACGTGGGCTCCCGGCAAGAGGTTTCCATTCTTACTTTGATGATGACTTCCTTGGTAGCCTTGGTACTTCATGCATATGCTTAA 1362 0.4545 MMPCFVPVFRFFTKQRPCMLLFLFMLSCTCFTSTEAYDALDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHITAPGWQLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIQNCCKGGVLSSWAQDPTNAVAAFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVKPTQFIQPDHRRVTQALMTWNVTCSYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQGNSSQSGNCIDPDTPHLASVVANPGKNTPLVQCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSEWNLVIQHPNFDNLTQLFSFNYKSLTPYGSINDTGMLWGVKFYNDLLMQAGRLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNVGSRQEVSILTLMMTSLVALVLHAYA* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2554 453 PANTHER PROTEIN COBRA 11 452 IPR006918 GO:0010215|GO:0031225
Aev05g2554 453 PIRSF COBRA 8 453 IPR006918 GO:0010215|GO:0031225
Aev05g2554 453 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Aev05g2554 453 PANTHER COBRA-LIKE PROTEIN 11 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2554 Aev-Chr5 27021445 27024769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2554 20 451 COBRA Gene Family AT3G02210 76.552 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2554 - - gmx:100783820 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2554 05 27021445 27024769 Aev06g3648 06 37090145 37093025 PCT
Aev06g3647 06 37087292 37089448 Aev05g2554 05 27021445 27024769 PCT