Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2553 ATGGTGGGAGTTCACACTCCAAAGAAGGACAATGAACCATTGATGCAATGCACCCATCACATGTGTCCAATCAGAGTACATTGGCATGTGAAGCAAAACTATAAAGACTATTGGCGAGTCAAGATCGCCATAACTAACTTCAACTACAGGATGAACTATTCCCTCTGGGCTCTTGCTATTCAGCATCCAAATCTCAACAATGTCACCCTAGTTTTCAGCTTTGATTACAAGCCTCTACTTCCCTATGAGTCTATAAATGACACTGGCATGTTCTATGGAATGAAATACTACAATGATCTTTTAATGGAAGCTGGACCAACTGAGAATGTTCAGTCAGAAGTACTTCTTCAGAAGGACAAGGATACATTCACATTCAAGCAAGGGTGGGCATTTCCTAGGAAGGTCTACTTTAATGGTGATGAGTGCATGCTGCCCCCACCTGATACCTAA 450 0.42 MVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWALAIQHPNLNNVTLVFSFDYKPLLPYESINDTGMFYGMKYYNDLLMEAGPTENVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGDECMLPPPDT* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2553 149 PANTHER COBRA-LIKE PROTEIN 1 149 - -
Aev05g2553 149 PANTHER PROTEIN COBRA 1 149 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2553 Aev-Chr5 27019226 27020499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2553 13 149 COBRA Gene Family AT5G60920 69.343 7.69e-75 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2553 - - gmx:100798678 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2553 05 27019226 27020499 Aev06g3647 06 37087292 37089448 PCT