Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2518 ATGGATCCACATGAAGAGCAACACTCCAATCCCTTTGCAACCACCCCTTCCGATTCCGACTCCGATTCCGACTCAGTGAGTTGCTTCGTCACCGATCTCTTCGAGACTCGCTCAGAGCGAACTCGCCATTGTTCCTGCGACGACGTCAACATAAACCCTTTCTCCGGCGTCATTTGCGATTTTCATGGGGAAGGAACTTTAGGATTAGGGTTAGGGTTCGGAGATGAAATTGGAACACAAAGCGACAATCATGATGGGGTTTTCGATTTTTCCGTCGGTGGTGATGGTTCGGGCGGGCTTAGGGTTGTTGGATTTGAGTCCGATTCTGATTCGGGTGGCGAGGAGTTTGGTGATCATGGTGATGGTGATCATAGGGTTGATGGTGGATTTGATGATTTTGATGTTAGGTTGTGTTGGGATAGCCTCTGTTTGGATGATCAGAGGGCGATTAATGAGAGTTTCGAGTGGGAGGAGGTAGATGAGAGGGTGAATGATAGGGATGATTTGAACTTGGTTATTGATGAAGGTGACGCTGATGATCAGTCAGTGGCGTCGGGGTTCTCGAACGGCGAGGACCCTGGTGAGGAGGCTGTGAGGTACCTCGAGTGGGAGATTCTCTTGGCTGTGAACAATCTGGAGAGGAATTCTATGTTGGATTATGATGCCAATGTTGATTCGTATTTGGCGATTGGGGATGGTTACATGTACACAACTGAATATGATGTTCTCTTTGGGCAGTTTCTGGAGAATGAGAATGCCTTGAAGGGTAGCCCTCCTGCAGCGAAGAGTGTTGTGGAGAATCTTCCTGTGGTGGAGTTGACAAAGGAGGAGTTGCAGGGGAAGAATGTGGCGTGCGCGATTTGTAAAGATGAGATATTGATGGAGGAGAAGGTGAGGAGGCTTCCTTGCTCGCACTGTTATCATGGAGACTGCATTATGCCGTGGTTGAGTATTCGCAACACCTGCCCTGTTTGTCGGTTTGAGTTGCCGACCGATGACCCTGATTATGAGCAGAGGAAGAGCCGGAGGGCTGCTCATGATCTGTCTGAGTTTGCAACGCAGATGCAATTTTGA 1074 0.4907 MDPHEEQHSNPFATTPSDSDSDSDSVSCFVTDLFETRSERTRHCSCDDVNINPFSGVICDFHGEGTLGLGLGFGDEIGTQSDNHDGVFDFSVGGDGSGGLRVVGFESDSDSGGEEFGDHGDGDHRVDGGFDDFDVRLCWDSLCLDDQRAINESFEWEEVDERVNDRDDLNLVIDEGDADDQSVASGFSNGEDPGEEAVRYLEWEILLAVNNLERNSMLDYDANVDSYLAIGDGYMYTTEYDVLFGQFLENENALKGSPPAAKSVVENLPVVELTKEELQGKNVACAICKDEILMEEKVRRLPCSHCYHGDCIMPWLSIRNTCPVCRFELPTDDPDYEQRKSRRAAHDLSEFATQMQF* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2518 357 MobiDBLite consensus disorder prediction 1 24 - -
Aev05g2518 357 SUPERFAMILY RING/U-box 273 333 - -
Aev05g2518 357 MobiDBLite consensus disorder prediction 8 24 - -
Aev05g2518 357 SMART ring_2 285 325 IPR001841 -
Aev05g2518 357 Pfam Ring finger domain 285 326 IPR001841 -
Aev05g2518 357 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 7 357 - -
Aev05g2518 357 CDD RING-H2_RNF126_like 285 326 - -
Aev05g2518 357 ProSiteProfiles Zinc finger RING-type profile. 285 326 IPR001841 -
Aev05g2518 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 332 IPR013083 -
Aev05g2518 357 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 7 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2518 Aev-Chr5 26621129 26622202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2518 89 341 C3H Transcription Factor Family AT3G02340 41.606 2.27e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2518 - - gmx:100812037 437.573