Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2456 ATGAAGACCAAGACCCCATTGAAGCAGCTCAAGCTCGCTGTTCCTGCTCAAGAAACCCCCATTACTTCATTCCTGACTGCAAGTGGCACATTCCATGACGGAGATCTTCTGTTGAATCAGAAAGGACTGCGTCTCATATCTGAAGAGAAAGAACCTTGTGATGGCAAGGAACTAGAATTCAACTTCACATTGGATGACCTTGAGACCGTCAAAGTAATTGGAAAAGGCAGTGGTGGTGTTGTTCAACTTGTTCGCCACAAGTGGGTTGGAAGATTGTTTGCTTTAAAGGTCATTCAGATGAATATACAAGAGGAGATTCGAAAACAAATTGTTCAGGAACTGAAAATAAACCAAGCATCACAGTGTCCACATGTTGTGGTTTGCTATCACTCATTCTATCACAATGGAGTTATATCTCTTGTGTTAGAATACATGGATCGTGGTTCTCTGGCAGATGTAGTTAGGCAAGTTAAAACAATTCTGGAGCCATATCTTGCCGTGGTTTGTAAGCAGGTGTTACAAGGTCTTGTTTACTTGCATAACGAAAGACATGTGATACATAGGGACATCAAACCCTCTAATCTTTTAGTCAATCACAAAGGGGAGGTAAAGATAACTGATTTTGGTGTTAGTGCTATGCTGGCAAGCTCAATGGGCCAAAGAGATACATTTGTAGGAACTTACAACTATATGTCGCCAGAAAGAATTAGTGGGAGTGCTTATGATTATAGCAGTGATATCTGGAGTCTGGGCTTGGTAGTACTTGAATGTGCCATAGGGAGGTTTCCTTACATACAATCTGAGGATCAGCAAAGCTGCCCTAGTTTTTATGAGCTTTTGGAAGCAATTGTGGAACGCCCTCCACCTTCAGCTCCAGCTGATCAGTTCTCTCCAGAGTTCTGTTCCTTTGTATCATCCTGCATCCAAAAGAACCCTCGGGATAGATTGACATCCTTGGAGCTTCTGGGTCATCCTTTCATAAAAAAGTTTGAAGATAAAGATCTAGATCTTGGGATTTTGGTAGGTAGCTTGGAACCTCCTGTAAATTTTCCTAGATAA 1059 0.4174 MKTKTPLKQLKLAVPAQETPITSFLTASGTFHDGDLLLNQKGLRLISEEKEPCDGKELEFNFTLDDLETVKVIGKGSGGVVQLVRHKWVGRLFALKVIQMNIQEEIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLADVVRQVKTILEPYLAVVCKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSAYDYSSDIWSLGLVVLECAIGRFPYIQSEDQQSCPSFYELLEAIVERPPPSAPADQFSPEFCSFVSSCIQKNPRDRLTSLELLGHPFIKKFEDKDLDLGILVGSLEPPVNFPR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2456 352 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Aev05g2456 352 Gene3D Transferase(Phosphotransferase) domain 1 148 341 - -
Aev05g2456 352 CDD PKc_MAPKK_plant_like 65 331 - -
Aev05g2456 352 Gene3D Phosphorylase Kinase; domain 1 42 146 - -
Aev05g2456 352 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 351 - -
Aev05g2456 352 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 351 - -
Aev05g2456 352 SMART serkin_6 67 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g2456 352 ProSiteProfiles Protein kinase domain profile. 67 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g2456 352 Pfam Protein kinase domain 68 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g2456 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Aev05g2456 352 SUPERFAMILY Protein kinase-like (PK-like) 64 340 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2456 Aev-Chr5 25585762 25590259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2456 1 352 MAP Kinase Kinase Gene Family AT5G56580 84.789 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Aev05g2456 Pkinase 2.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2456 K04368 - gmx:100786284 666.381