Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2424 ATGTTATTGTTTTTGCCAATTCGCACAGCTTGCTCTCTCTTCTTCAGAGAACCAACCATGGTTGCCGCAAAGAAAACCAAGAAGACCCATGAGAGCATTAACAACAGGCTCGCTCTTGTGATGAAGAGTGGGAAATATACCTTGGGTTACAAGACGGTTCTCAAGTCCCTCAGAAACTCTAAAGGTAAACTCATTATCATTTCCAACAATTGCCCACCATTGAGGAAATCAGAAATTGAGTACTATGCTATGTTGGCCAAGGTTGGAGTTCATCATTACAATGGGAACAATGTGGACTTGGGCACTGCTTGTGGAAAATATTACAGAGTTTGCTGCCTCAGCATCATTGATCCAGGTGACTCGGATATCATCAAGACGTTGCCTAGCGAGCACTAG 396 0.4343 MLLFLPIRTACSLFFREPTMVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIISNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPSEH* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2424 131 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 32 124 IPR004038 -
Aev05g2424 131 Gene3D - 21 127 IPR029064 -
Aev05g2424 131 PANTHER 60S RIBOSOMAL PROTEIN L30 20 130 - -
Aev05g2424 131 SUPERFAMILY L30e-like 32 125 IPR029064 -
Aev05g2424 131 ProSitePatterns Ribosomal protein L30e signature 1. 43 67 IPR022991 -
Aev05g2424 131 ProSitePatterns Ribosomal protein L30e signature 2. 99 119 IPR022991 -
Aev05g2424 131 PANTHER RIBOSOMAL PROTEIN L30 20 130 IPR039109 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2424 Aev-Chr5 25196580 25199430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2424 20 131 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 85.714 7.71e-70 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2424 K02908 - mnt:21405348 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3565 06 36489060 36490160 Aev05g2424 05 25196580 25199430 PCT