Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2406 ATGTTCCCTTCATCTACTTACACTAATGGCCCTTTCCCTTACCATTATCCTTGTTTCCCTTCATCATCTTCAACTTCTTCATACCCTTTTTTCCCTTTTCTCAACCCTGAGAATAACAACAACAACAGCACCAGCAATAATAATAATAATAATAATAATAATAATAATAATAATGTCACTACCTTCCTTCATGATCCACTTTGTGTTCCTTACATACCAATCCACAACAACAATGGTCCGATCGCAGAAACAGCACTGATGACCAATAATTTGGCATCAGTAGCGTCGGTGTCAGTTACTGATGCACCTTCGGTTTCTGTTTCGGCAGAAATGCCGAAACAAGACCCAAGTAGTGGTGGTGGTGGTGGTTACTACGGCGGCGGTGGGATATCGTGTTTGCTGGCGAAGAAGCCAGCGAAGAAGGACAGGCACAGCAAGATTTACACCTCTCAGGGGCTAAGAGACAGAAGGGTGAGACTCTCCATCGCTATAGCGAGAAAGTTCTTCGATCTCCAAGACATGTTAGGGTTTGACAAGGCGAGTAACACGCTAGACTGGCTCTTCAACAAGTCGAAGAAGGCCATTAAGGAGCTAGCGAGGAGCAAGAGCAACGACGACGACAACAACAATAAGAGCTTCTCCACATCCTCTGAGTGCGACGAAGAAGACCACACTGAAGTGGTGTCAACAAGAAGCGATGATGGTGTGAACAAAGAGAGGAATATTAACCATAATAATAATGATAAGGTGAAGAAGAGGGTGCAGAAGGAAAATGGTGGTAGTAGTAATAGTGCGAGGGCGAAGATGAAGGAGTCAAGAGAGAAAGCGAGAGCAAGAGCAAGGGAAAGAACTAGTAACAAGATGAACAACAACAATAATAACATGATGAAGAAAAAATGCCCTGTAACTGAAATGCTTCATCATCATCATCACCTTGTGGGTGGAGGTGAAGGAGGAGGAGGAAGAGATGATTTCAATGTGATAGAAGAATCGATTGTGATAAAAAGGAAGTTGAAGCCATCTATGATGGTTTCATCGTCGTCGTCTCATCACCACCATCACCAAAACTTTGGAGGTATTATGCCAAAGGAAGCAGGAGCAAGTAGTTTCAACAACAACAGTGACTACCACCACTCCTCCTTCCCCCCTAATAATAATAATTTGTCACCAAATTGGGATAATAATAATGGATCCTCTCAGCCAAACCGCTCCAACTTCTGTGCTATTGCAAGCATGAATCTATCCACAGGGCTTCAGATCTTTGGAAAGTCTTGGGAGGAGTGCACCAATCCACGTCTACACTAG 1305 0.4345 MFPSSTYTNGPFPYHYPCFPSSSSTSSYPFFPFLNPENNNNNSTSNNNNNNNNNNNNNVTTFLHDPLCVPYIPIHNNNGPIAETALMTNNLASVASVSVTDAPSVSVSAEMPKQDPSSGGGGGYYGGGGISCLLAKKPAKKDRHSKIYTSQGLRDRRVRLSIAIARKFFDLQDMLGFDKASNTLDWLFNKSKKAIKELARSKSNDDDNNNKSFSTSSECDEEDHTEVVSTRSDDGVNKERNINHNNNDKVKKRVQKENGGSSNSARAKMKESREKARARARERTSNKMNNNNNNMMKKKCPVTEMLHHHHHLVGGGEGGGGRDDFNVIEESIVIKRKLKPSMMVSSSSSHHHHHQNFGGIMPKEAGASSFNNNSDYHHSSFPPNNNNLSPNWDNNNGSSQPNRSNFCAIASMNLSTGLQIFGKSWEECTNPRLH* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2406 434 MobiDBLite consensus disorder prediction 35 58 - -
Aev05g2406 434 MobiDBLite consensus disorder prediction 216 256 - -
Aev05g2406 434 MobiDBLite consensus disorder prediction 267 284 - -
Aev05g2406 434 MobiDBLite consensus disorder prediction 199 296 - -
Aev05g2406 434 MobiDBLite consensus disorder prediction 366 399 - -
Aev05g2406 434 Pfam TCP family transcription factor 139 290 IPR017887 -
Aev05g2406 434 MobiDBLite consensus disorder prediction 344 399 - -
Aev05g2406 434 ProSiteProfiles R domain profile. 270 287 IPR017888 -
Aev05g2406 434 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 42 433 - -
Aev05g2406 434 ProSiteProfiles TCP domain profile. 140 198 IPR017887 -
Aev05g2406 434 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 42 433 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2406 Aev-Chr5 24992335 24994015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2406 136 292 TCP Transcription Factor Family AT1G67260 43.889 1.21e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev05g2406 TCP 3e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2406 - - cam:101499957 332.413