Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2387 ATGACGAGTGATATGAAAAACAATATGAATAACAATTCGGTAGCGGGATTTGAAAGAGCAGTGGTGTACAAAGAGTGCAGGCGTAATTATGCTGCCTCCCTTAACAAAGTCTCTCGCGGCGGATGTTGTGAGTTCCTCGATAGTGGATGCAATGATGACAACGCTGCTAGGGATGACATGCTTTGTGCTACAAGCAATTGTCACCGCAACTTTCACTTTGGAGATGGATGCAAAGAGGAAGAAGAAGACAGTGTTCACTACAGAGCAAAAAAGTAG 276 0.4384 MTSDMKNNMNNNSVAGFERAVVYKECRRNYAASLNKVSRGGCCEFLDSGCNDDNAARDDMLCATSNCHRNFHFGDGCKEEEEDSVHYRAKK* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2387 91 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 23 75 IPR006456 -
Aev05g2387 91 Pfam ZF-HD protein dimerisation region 21 72 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2387 Aev-Chr5 24823372 24824105 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2387 21 72 ZF-HD Transcription Factor Family AT4G24660 40.385 2.79e-08 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev05g2387 ZF-HD_dimer 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2387 - - lja:Lj0g3v0224609.1 70.4774