Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2386 ATGGATGCAAAGAGGAAGAAGAAGACAATGTTCAGTACAGAGCAAAAAAGTAGGATGATGAAGTTTGCTGTAGAGAGGCTGGGGTGGAAGCCAAAGAAGGATGACAAACTAGAAATTGAGCGCTTCTGGTTGGAAATGGGGATCACTCGTAAGATGTTTCTGGTTTGGGTCACCAATAACCGCCACAAAGCCGTAAAAAATATCACTGCACCACAGAACTAA 222 0.4324 MDAKRKKKTMFSTEQKSRMMKFAVERLGWKPKKDDKLEIERFWLEMGITRKMFLVWVTNNRHKAVKNITAPQN* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2386 73 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11 3 64 - -
Aev05g2386 73 SUPERFAMILY Homeodomain-like 3 64 IPR009057 -
Aev05g2386 73 Gene3D - 1 66 - -
Aev05g2386 73 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 3 64 - -
Aev05g2386 73 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 4 61 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2386 Aev-Chr5 24820254 24820475 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2386 3 66 ZF-HD Transcription Factor Family AT1G75240 46.875 1.73e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2386 - - gmx:102667095 89.7373