Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2350 ATGAGGGCAGGGAAAGGGAACCAGGAAGAGGAAGAGTACGAAGAGGAGGAATTCGGTTCTTCTAGGAAACAAGGTCCTTCCTCTGTTCCTAACAACAATAACACCAACAAAGATGCAAAAGCTATTGATAAGGCTAGTGCTACGAGATCGAAACATTCGGTGACTGAGCAGCGAAGAAGGAGCAAGATAAATGAGAGATTCCAGATATTAAGGGATCTTATACCTCATAGTGATCAAAAGAGGGACACGGCATCATTCTTGTTAGAGGTTATTGAGTATGTTCAGTACTTACAAGAGAAGGTACAAAAGTATGAGGGATCATACCAAGGTTGGGGTCATGAGCCCTCCAAGCTGATGCCATGGAGAAATAGCCATTGGCGTGTCCAAAGCTTTGTTGGTCAACCTCAAGTTCTAAAGAACGGTTCAGGTCCAGTATCACCTTTTCCAGGAAAGTTTGATGAAAGCAACATTAGTATCTCTCCAAGTATGCTTAGTGGCACACATAATATGATAGATCCAGATCAGAACAGGGATATTGTCAGCAAAGCGGCAGAGGGGCAAGCAGATTTAGCCAGCAAGGCGATACCTCTGCCCATGGCTATGCACACAACCATGTCTGTACCTGTCAGAAGTGATGGTGTACTTGCCCATCCTCTCCAGGGAAGTGTTTCTGAAGCGCAATCAACTGATTGCCCAGCCACTAGTGAACCACCAAACCATCAAGACGAACTGACTATTGAAGGAGGGACAATCAACATATCAAGTGTATACTCCCAAGGGTTGTTGAACAATCTGACACAAGCACTGCAGAGTGCTGGTTTAGATCTGTCACAGGCTAGCATCTCAGTTCAGATTAATCTTGGAAAACGAGCAAACAAAGGGCCAAGCTGTGGGACCTCTTCTCCCAAGAATCATGAAAATCTCCCTTCTAGCAATCAAGCGATTGCACATTTTAGAGATGAGAGTGAAGACTCAGATCAAGCTCAGAAACGACTGAAAACATATAAGTGA 1011 0.4441 MRAGKGNQEEEEYEEEEFGSSRKQGPSSVPNNNNTNKDAKAIDKASATRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGHEPSKLMPWRNSHWRVQSFVGQPQVLKNGSGPVSPFPGKFDESNISISPSMLSGTHNMIDPDQNRDIVSKAAEGQADLASKAIPLPMAMHTTMSVPVRSDGVLAHPLQGSVSEAQSTDCPATSEPPNHQDELTIEGGTINISSVYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRANKGPSCGTSSPKNHENLPSSNQAIAHFRDESEDSDQAQKRLKTYK* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2350 336 CDD bHLH_AtBIM_like 46 122 - -
Aev05g2350 336 MobiDBLite consensus disorder prediction 222 241 - -
Aev05g2350 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 97 IPR011598 GO:0046983
Aev05g2350 336 MobiDBLite consensus disorder prediction 42 60 - -
Aev05g2350 336 Pfam Helix-loop-helix DNA-binding domain 49 98 IPR011598 GO:0046983
Aev05g2350 336 MobiDBLite consensus disorder prediction 1 60 - -
Aev05g2350 336 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 334 IPR044295 GO:0003700|GO:0006351|GO:0046983
Aev05g2350 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 45 118 IPR036638 GO:0046983
Aev05g2350 336 SMART finulus 53 103 IPR011598 GO:0046983
Aev05g2350 336 Gene3D - 44 116 IPR036638 GO:0046983
Aev05g2350 336 MobiDBLite consensus disorder prediction 317 336 - -
Aev05g2350 336 MobiDBLite consensus disorder prediction 291 316 - -
Aev05g2350 336 PANTHER TRANSCRIPTION FACTOR BIM2 1 334 - -
Aev05g2350 336 MobiDBLite consensus disorder prediction 22 41 - -
Aev05g2350 336 MobiDBLite consensus disorder prediction 291 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2350 Aev-Chr5 24171471 24181321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2350 1 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 56.579 7.54e-112 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g2350 HLH 1.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2350 - - lang:109361152 559.296