Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2284 ATGGATGGAAGAGAAGCTATGACATTTTCTGGTGGTTCTGCTTCATTCTATGTACATAGAGGAGGGGGAGTTGGTGGGTCTGGAACACCACCAGGAGGGTTCCAAGGAGCACCTGGGTTTAGGGCTTTGTCAAATATGAGGGGCGGTGGCTCTGTTGGTGGTTCCACATTTTCAGCAGAGTCTCATCGTTCCAATTTTAGTCACTGTATGAGCATAGGTTCCTACTCTGCACCAGTTGGAGGAGGAGGCGTAGCTTCCTCTTCAGGGGAGACTGTGAAGAAGAAAAGAGGGAGGCCTCGCAACACTCTGGCAGAGAAGCGGCGGAAAGGTCGTCCCCCAGGAAGTGGGAGGAAGCAACAGCTAGCCTCTCTAGGTGAATGGATGAACAGGTCTGCAGGAATAGCTTTCTCACCTCATGTTATCACCATTGAACCTGTAGAGGACATTGTTTCCAAGTTATTGTCATTTTCACAGCAGAGACCAAGGGCTTTATGCATCTTGTCAGGCACTGGGACGGTTTCTTCAGTCTCTCTGCATCAGCCTGCTTCTTCTACTGGCCAATTTCATATATTATGCTTGTCGGGTTCTTACTTGGTTGCTGAAGATGGTGGACCTCGTAGTAGAACAGGTGGAATAAGCGTTTCCCTTTCTAGTCCTGATGGTCATGTTATAGGTGGCTGTGTTGCTACACTTATTGCAGCAAGCCCATTGCAGGTGGTAGTATGCAGTTTTGTATATGGTAGCTCTAAGTCAAAAACCATGGAAGTGACAAGTACAAAGGGCTCAGAGCCTCATAGTAGTGGTAAGTTAGCTTCTCCGATGAATGTTCCTCCTCCTATTCAAAGCTACAATGCTTCTCCAATATGCATTTGA 873 0.4742 MDGREAMTFSGGSASFYVHRGGGVGGSGTPPGGFQGAPGFRALSNMRGGGSVGGSTFSAESHRSNFSHCMSIGSYSAPVGGGGVASSSGETVKKKRGRPRNTLAEKRRKGRPPGSGRKQQLASLGEWMNRSAGIAFSPHVITIEPVEDIVSKLLSFSQQRPRALCILSGTGTVSSVSLHQPASSTGQFHILCLSGSYLVAEDGGPRSRTGGISVSLSSPDGHVIGGCVATLIAASPLQVVVCSFVYGSSKSKTMEVTSTKGSEPHSSGKLASPMNVPPPIQSYNASPICI* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2284 290 MobiDBLite consensus disorder prediction 254 278 - -
Aev05g2284 290 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 102 287 - -
Aev05g2284 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 245 IPR005175 -
Aev05g2284 290 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 101 - -
Aev05g2284 290 MobiDBLite consensus disorder prediction 41 60 - -
Aev05g2284 290 Gene3D - 138 262 - -
Aev05g2284 290 ProSiteProfiles PPC domain profile profile. 130 265 IPR005175 -
Aev05g2284 290 MobiDBLite consensus disorder prediction 80 121 - -
Aev05g2284 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 248 - -
Aev05g2284 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 101 IPR039605 GO:0003680
Aev05g2284 290 CDD DUF296 138 244 IPR005175 -
Aev05g2284 290 MobiDBLite consensus disorder prediction 254 269 - -
Aev05g2284 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 102 287 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2284 Aev-Chr5 23175694 23185734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2284 1 247 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 50.000 4.60e-75 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2284 - - aip:107643074 361.688