Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2283 ATGGAACAATATACTTCTGAAGACAAGGTTGAGTGTAAAAGTGTTAGAAGGCAATCTTCATGTCCAGTTGCTTTGACCAAAAAGGTGAATGGCGGCTGTGTTATTTTCAACCAAATTGCTACAGAGTGGCTTTTGCAATCAAGTCAGCTTCTTCAGAATCCTTTTTCTAGTGATGCATTTGTTAAAGCACTAAGGAAGGCTGAACAGTTCCTTTGGGCTGGTTCTGAGATGGACTCTGTTCGGGATATGGTTAAGACTCTGATTGCAGCTCAGAAGTGGGCAAAAGGCATAAGAGATTGTGTAACAAAAATTGAGTTTTGGTATAAAGACTCGAGTGTAAAGAAAGTTCATTTGGAGTCCATTGATGAGTTACTGGGATTTAATCCTGCACCATGCAATGAGCCTCATTATCATAAATTGAAGGAATACGCAGAAGAAGCAAGGTTGTTAGTTCAGGAGATTGATACTGCTTTGTCTATCTGTTCAAAAATGTCTGATTTGGAAAGTTTATACTCAAGAGCTTGTAGCTTACCCATCCATGTGAAAGATATTCAGAAACTAGAAGGGAAAATTTCTTCTACTAAGGCATGGCTGGATAGCGTTAGAAAATTTATCTCAGTGAAACATCCCATTGTTTTAGAGGTTAATGCTCTTTACACATTAAAATCAGAGATTGCGGACCTTCAAGTTCATCTTCCAGAGATAGATATGCTTCACAGTCTGTTAAGTCAAGTTGAATCTTGTAGTGTTCAATGTCGAGTGATGTTAGAAGAACCTATGAATCTAGAGAATGTTGGTATGCTGCTTAAGAAATGGGAGAATTTTACTGTTGATGTACCAGAGTTGCAGCTTCTAAGGAAATACCATTCGGATGCTGTTTCATGGGTTTCCCACTGTAATGATATCTTAGGGAGAGTTCATGTGCATGAAGATCAAACTTATACAGTTAATGAATTGATGCACATTTTTGAAGAAGGTTTATCTTTAAAAATTCAAGTTGATGAGTTGCCATTAATTGAGGTTGAGCTGAAGAAGGCTAAATGCCGGGAAAAAGCTTTGAAGGCGCGGGACTTGAAAATGCCTTTAGAATTCATTCAGCAGTTGTTGGAGGAGGCCACAATGCTTCAAATTAATGGAGAGAAACTATTCATCAATTTATCTTCTGTGCTTGCTCTAGCCATGCCTTGGGAGGAAAGGGCTAGAGAGATTCTTTCACATGAGTCTCCTATTTTTGACTTTGAGGACATGATCAGGGCTTCAGAAAACATATTTGCTATTCTTCCGTCACTTAATGATGTCAAGGATGCATTATCAGAAGCTAATTCCTGGTTAAGAAATTCAAAGCCATACTTAGTCTCTTCTTCAAATGCTTCAAATTCTTTGTGGAAAGTTCAGGACTTGCAGATGTTGGTTTTTCAATCGAAACTTCTTAAAATATCCTTGGAAGAAAGAGGGATGCTTGAATTAGTTTTGAAGAACTGCAAACTTTGGGAGTGTGAAGCATCTTGTTTACTAGATGATGCTCAGTGCCTCTTTGAATTGGATAACACTATTGAAGGAATAAGCAGTGGTTTATTGTGTAAAGTTGAAGATCTTATTGCAAGAATCCAATCTACAATAAGATCTGGTGTCTCACTTGGTTTTGACTTCAAGGAGACTTCAAAACTTCAAGCATCTTGTTCTACACTGCAATGGTGCAAAAGAGCCCTTTCTTACTGTGATAGTTCTCCTTCTTTAGAGGATGTATTCGAGGTTGCAGAAGGTCTTTCTCATTCTTGTGGTTCTGGTGCACTTTTGAAATTACTGGTTGATGGAGTTGAATGGCTAAGGAGAGCACTGAGGGGAATATCTGGACCTCAGAATTGTAGAAGGTGCAAGTTGACTGATGTTCAAGATATTCTTAATGATTATCAGACAATTAATATGACCTTTGCAGCTGTATACTGTCAACTTGAAGAAGCCATTAAAAAACATAAGTTGTGGCAAGAACAAGTGCATCACTTTTTTGGTCTAAGTTATGGGGAACGGTCTTGGTCATCATTATTGCAGCTCAAGGAACTTGGGGATGCTGTTGCCTTTAGTTGTTCAGAACTGAATTTGATTTTATCTGAAGTTGAGAAGGTGGAAAATTGGAAGAAAACATGTATCAACAACATAGGAATTTCACTCCAAAATGAAGACTCACTGATTGATGTGCTGGAGAAGATAAAACAGAGCCTAGAGAGATCGTTGTTCATATATGGAAAGATGCAAGATCAAAAGGAACAAAACCTATGCATCTGCTGTTTTATTGATTCTGAAGATCAGGAACTTCTTACTTGTTCGACTTGTTTGGACTGCTATCATTTGCGGTGCATCGGACTAATGGCAAAAGACACAGCCATTGAAACCTATAAGTGTCCTTACTGTGAAATTTTGAAGGGTGAATCTCGTTATCCTAGCGGAGGTGGCCTCCTGAGGTTTGGGAAGAAGCATGTTGAATTGAAAGTTCTCATTGAACTTCAGTCTGATGCTGAACATTTGTGTTTGAGGATTGATGAAAGGGATGTTCTGAACCAGCTTGTTGAGAAATCTCTTGCATGCAAATCTGAATTGAGAGAAATAGTAAACTTCGCATCAGCTACTGTTGATGAAGATATTAGCATTATCTCTGAAAAATTGACCAAGGCTGTAAAGGCTAGCGAAGTGGCTGGTGTCTGGGATCAGCATGATAATTGTGAGCTTGAGTTGGCATTAGCAAAGAACTTGTGGAAAATCCAGGTCAATAGATTGCTAGATGGTGTACGAAAGCCCACTATCCAACAGATTCAGAAGCATATGAATGAGGGACTGGCTATGGAAATATCACTTGAAGATTACTATATGCTGAAACTTACAAATGTGAATTGCTTAGGTTTACAGTGGGCAGAACTCGCCAAAAAGGTGGCAATGGATTCTGGGGCACTAAGCCTAGATAAAGTTTATGAACTTAGAGTGGAAGGTGAAAACTTGCCTGTTGATGTTGATGAGGAACTTCAGATGTTAAGAGCTCGATGCATGCTTTATTGTATATGCCGAAAGCCCTTTAACCGAAGAACTATGATTGCATGTGATCTTTGTAATGAGTGGTATCACTTTGATTGCATGAAGTTACCATACACGCAACAGGTCTACATTTGTCCTGCATGTAACCCGCGTACAGAAGAATCACCTACAAACCATGAGAGATTAACTAGTGCGAGATTTGTGGAGCCTAAAACCCCATCTCCAAGGCATACTAACCCTAGAAAGAAACAGAAGAGAGATGTACGCACTATCAATTACCAGATGCTTGCATCAGGAGAACATGATGGTAGTAATTTTAGCTGGATTAGAAACGTCAACGCGAACGATGATGACTCAAGGGAGAGGGCCTCCGGTGGCGGTGGCGACAGTCGTGTTGAGTTGAGCTGCTATAGAGTAGGCCCAGAAGCAAAGAAACTCGCCAACGATAAGTTCAGAAGGCGCAGAAGAATCTCGTTGCGTTTGACCACCTACATGGCACCTCCTGGTTGCTCTATGTGTCGGTTTCTTGGGGGTCATGGAGTCTCTCTTGCTCCGTTTCATACTCAAATCTTCTTCAGAACAGCTCTTTGCAGGGCCATTGCAAATCGTGGAGCTTTTCAGACTGTGCACAGTACACGACTTCCAATACTTCTTAGGAAATGTTCTGAGCTTGATGAGAGTGTTCCAAGTATTTGGAGTCCTGAGACTTGA 3735 0.3997 MEQYTSEDKVECKSVRRQSSCPVALTKKVNGGCVIFNQIATEWLLQSSQLLQNPFSSDAFVKALRKAEQFLWAGSEMDSVRDMVKTLIAAQKWAKGIRDCVTKIEFWYKDSSVKKVHLESIDELLGFNPAPCNEPHYHKLKEYAEEARLLVQEIDTALSICSKMSDLESLYSRACSLPIHVKDIQKLEGKISSTKAWLDSVRKFISVKHPIVLEVNALYTLKSEIADLQVHLPEIDMLHSLLSQVESCSVQCRVMLEEPMNLENVGMLLKKWENFTVDVPELQLLRKYHSDAVSWVSHCNDILGRVHVHEDQTYTVNELMHIFEEGLSLKIQVDELPLIEVELKKAKCREKALKARDLKMPLEFIQQLLEEATMLQINGEKLFINLSSVLALAMPWEERAREILSHESPIFDFEDMIRASENIFAILPSLNDVKDALSEANSWLRNSKPYLVSSSNASNSLWKVQDLQMLVFQSKLLKISLEERGMLELVLKNCKLWECEASCLLDDAQCLFELDNTIEGISSGLLCKVEDLIARIQSTIRSGVSLGFDFKETSKLQASCSTLQWCKRALSYCDSSPSLEDVFEVAEGLSHSCGSGALLKLLVDGVEWLRRALRGISGPQNCRRCKLTDVQDILNDYQTINMTFAAVYCQLEEAIKKHKLWQEQVHHFFGLSYGERSWSSLLQLKELGDAVAFSCSELNLILSEVEKVENWKKTCINNIGISLQNEDSLIDVLEKIKQSLERSLFIYGKMQDQKEQNLCICCFIDSEDQELLTCSTCLDCYHLRCIGLMAKDTAIETYKCPYCEILKGESRYPSGGGLLRFGKKHVELKVLIELQSDAEHLCLRIDERDVLNQLVEKSLACKSELREIVNFASATVDEDISIISEKLTKAVKASEVAGVWDQHDNCELELALAKNLWKIQVNRLLDGVRKPTIQQIQKHMNEGLAMEISLEDYYMLKLTNVNCLGLQWAELAKKVAMDSGALSLDKVYELRVEGENLPVDVDEELQMLRARCMLYCICRKPFNRRTMIACDLCNEWYHFDCMKLPYTQQVYICPACNPRTEESPTNHERLTSARFVEPKTPSPRHTNPRKKQKRDVRTINYQMLASGEHDGSNFSWIRNVNANDDDSRERASGGGGDSRVELSCYRVGPEAKKLANDKFRRRRRISLRLTTYMAPPGCSMCRFLGGHGVSLAPFHTQIFFRTALCRAIANRGAFQTVHSTRLPILLRKCSELDESVPSIWSPET* 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2283 1244 SUPERFAMILY FYVE/PHD zinc finger 1010 1063 IPR011011 -
Aev05g2283 1244 ProSitePatterns Zinc finger PHD-type signature. 759 803 IPR019786 -
Aev05g2283 1244 Gene3D Cupin 1010 1123 - -
Aev05g2283 1244 MobiDBLite consensus disorder prediction 1061 1096 - -
Aev05g2283 1244 SUPERFAMILY FYVE/PHD zinc finger 753 804 IPR011011 -
Aev05g2283 1244 Pfam PLU-1-like protein 533 713 IPR013637 -
Aev05g2283 1244 Pfam PLU-1-like protein 261 506 IPR013637 -
Aev05g2283 1244 Pfam PHD-finger 1015 1058 IPR019787 -
Aev05g2283 1244 Coils Coil 723 743 - -
Aev05g2283 1244 ProSitePatterns Zinc finger PHD-type signature. 1016 1056 IPR019786 -
Aev05g2283 1244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 744 808 IPR013083 -
Aev05g2283 1244 SMART PHD_3 758 804 IPR001965 -
Aev05g2283 1244 SMART PHD_3 1015 1057 IPR001965 -
Aev05g2283 1244 PANTHER CXXC-TYPE ZINC FINGER PROTEIN 1 823 1094 IPR037869 GO:0048188
Aev05g2283 1244 PANTHER CXXC-TYPE ZINC FINGER PROTEIN 1 823 1094 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev05g2283 PLU-1 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2283 K11446 - gmx:100819576 1677.92