Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2253 ATGGCTGCACAAGAACTCAACTTAGCCTATTTTACTAAGGATTTCATAGTCAATGCCAATGAAGAGAAACTAAACATAACTATCACTCCATATCCTCTAGTTTCCAATGCATTTGCCTTTATAAATGGCATTGAGATCTTCTCAGTGCCCTCTACTTTATACTTTCAAGATTCCAAGGTTCACATCTCTTACCTTGGACACCAGGAACCATTCAACATTAGTGACAAGTATGCTCTTGAGATGCTGTACCTGGTTAATGTTGGTAGCGATGAGCACACTTTTGACGTTGAAAATGCATTTGGGACCTGGCTGGAAGATTTAAGCTACATATCAGATTCAAATTATGGAAGTAGCCTCAACACACAAAATCGGCCCATTTCCTATACTTACAATGCTTCAACTTCTTATGTTTCCAATTATTCAGCTCCACTTGAATTATATTGGACTGCCAGGACAATGAACAGCGATGGAGATGCCCACATGAGGTATAAATTAACATGGTCATTCTCTGTTGATTCTGGATTCAGATACCTTGTTAGGCTTCATTTCTGCGAGATCTCCATGGCTGTAACACAGGTCAATCAAAGGGTGTTCAAAGTGTATATCAACAACCAAACAGCAGAGGAAAGCATGGATGTAGTTGCTCTGGCTGGTGGACCATTTATTGCTACATACAGAGACTATGTTGCTATTGTTCCCATGGAAAATGAGAGAAGGCAAGAGATGCGGATTGCACTTCACCCTAACATAGAGTCAAAACCTAAGTATCATGATGCCATATTGAATGGCATTGAGATCATCAAGTTAAGTGATCACAATTTTAATCTTGCAGCAAATTTCCCACTGAAAGAGGAAGGTAAGAAGAATAAAGTTCGACTTGCCAATGCTCTTGCTGGTACATTAGGTGCCACTTTGGGACTATCTGTCATCTTTTTCGTTCTTATTAGCCGAGTTCGGAACAAACAAAAGCAGGGAAATTTTCGGGTATTCCCTTTATGTTCTACTGGAAAAAGGCACAAGAATGTACAAGTAACAGTGACCTCAAGTCAATGTTACCGATTTACATTGGCAGAGATAAGCATAGCCACTGCCAGCTTCAGTGAAGATCTTGTGATTGGGGAAGGAGGCTTTGGAAAGGTGTACAAAGGCACAATCTACCATAGAGTTACTCCTTTGGCTATAAAGCGCTGCAATCCCAGTTCTCGCCAAGGATTTAAGGAGTTTCAAAATGAGATCAACTTTTTCTCATTCTGTCACTTGAATCTTGTGTCACTAATCGGATACTGCCAAGAGGACAATGAATTGATACTTGTCTATGAATACATGGCTAATGGCACTCTTAGCGATCATTTATACAAGAAACAGAAGCAGCCACTTCCTTGGAATCTAAGACTAAAGATTTGTGTTGGTGCAGCTCGAGGATTGCATTACTTGCACACAGGCACAAGGCACCCAATCATTCACCGTGATATCAAGTCAGGCAACATATTGTTGGATCACAACTGGGTGCCTAAGATTGCTGATTTCGGGTTATCTAGAGTGGTAACCTCAATTTCCCACAGCCATGTTAGCACTGAGGTTAAGGGTACTTTTGGATACTTAGATCCTGAGTACTACATGCGAAGAAAATTGACTGAAAAATCTGATATCTATTCATTTGGTGTGGTGTTGTTTGAAGTGTTATGTGGAAGACCAGCAGTGAATCCTGCGGTAGCAGAAGAGGGAAATGAGAAGGTTGGCTTAGCTCAATGGGCATTGCATTGCCATCAATCCGGAAACACTGAACAATTAGTTGACTCACATTTAGAAGGAAAGATCAGATCAGAAAGTCTGATGGCATTTGTGGAAATTGGTATCCAGTGCTTGAGTGATAAGAGTGCAGAAAGGCCAACAATGGGGAAGTGCTTAGTAAATTGGAGAACATCTTGTCCATGCAGGAGAGTTTAG 1947 0.4083 MAAQELNLAYFTKDFIVNANEEKLNITITPYPLVSNAFAFINGIEIFSVPSTLYFQDSKVHISYLGHQEPFNISDKYALEMLYLVNVGSDEHTFDVENAFGTWLEDLSYISDSNYGSSLNTQNRPISYTYNASTSYVSNYSAPLELYWTARTMNSDGDAHMRYKLTWSFSVDSGFRYLVRLHFCEISMAVTQVNQRVFKVYINNQTAEESMDVVALAGGPFIATYRDYVAIVPMENERRQEMRIALHPNIESKPKYHDAILNGIEIIKLSDHNFNLAANFPLKEEGKKNKVRLANALAGTLGATLGLSVIFFVLISRVRNKQKQGNFRVFPLCSTGKRHKNVQVTVTSSQCYRFTLAEISIATASFSEDLVIGEGGFGKVYKGTIYHRVTPLAIKRCNPSSRQGFKEFQNEINFFSFCHLNLVSLIGYCQEDNELILVYEYMANGTLSDHLYKKQKQPLPWNLRLKICVGAARGLHYLHTGTRHPIIHRDIKSGNILLDHNWVPKIADFGLSRVVTSISHSHVSTEVKGTFGYLDPEYYMRRKLTEKSDIYSFGVVLFEVLCGRPAVNPAVAEEGNEKVGLAQWALHCHQSGNTEQLVDSHLEGKIRSESLMAFVEIGIQCLSDKSAERPTMGKCLVNWRTSCPCRRV* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2253 648 ProSiteProfiles Protein kinase domain profile. 366 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g2253 648 Gene3D - 77 270 - -
Aev05g2253 648 Gene3D Transferase(Phosphotransferase) domain 1 442 643 - -
Aev05g2253 648 SMART serkin_6 366 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g2253 648 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 638 - -
Aev05g2253 648 Pfam Protein tyrosine and serine/threonine kinase 371 635 IPR001245 GO:0004672|GO:0006468
Aev05g2253 648 CDD STKc_IRAK 372 633 - -
Aev05g2253 648 Pfam Malectin-like domain 11 268 IPR024788 -
Aev05g2253 648 PANTHER OS07G0166700 PROTEIN 4 638 IPR045272 GO:0004714|GO:0006468
Aev05g2253 648 SUPERFAMILY Protein kinase-like (PK-like) 340 636 IPR011009 -
Aev05g2253 648 ProSitePatterns Protein kinases ATP-binding region signature. 372 395 IPR017441 GO:0005524
Aev05g2253 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Aev05g2253 648 Gene3D Phosphorylase Kinase; domain 1 330 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2253 Aev-Chr5 22829647 22831593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2253 3 638 Receptor kinase-like Gene Family AT3G51550 43.881 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aev05g2253 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2253 - - gmx:100776324 849.736