Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2235 ATGGAGATGGAGTACACAACCGAAGGTGTTCATCACATAATGAGAAATTTATCTGATTGTGGCTCATCAGCAACAAATGGGAGTGAAGATGATATGTTAATAAAGAAAGGTCCATGGACAGAAGAAGAGGATTCTGTTCTGAGCAACTATATCACCATCCACGGTGAAGGTCTAAAGCGAACTGGCAAAAGCTGTAGGTTAAGATGGTTAAACTACTTGCGCCCAAATGTTAGACGTGGGAACATCACCCTCCAAGAACAGCTTTTGATTCTTGACCTCCATTCCCGCTGGGGCAATAGGTGGTCTAAAATAGCAGAACAATTGCCTGGAAGAACAGACAATGAGATCAAGAACTATTGGAGGACCAGAGTGGTGAAGCAAGCCAAGCAACTGAAATGCGACGTCAACAGCAAACAGTTCAGAGACACGTTGCGTTATGTATGGATGCCACGTCTCATGGAGCAGATTCAGGCCTCTTGCGGGAACACTTCTTCTTCCCAAACTACTACCCATAGCACTTTGTCTTTAGCTTCATCTTATTCTTCATCAGGATTTCATGCCCAAACTTCTCTCTCTGACTCTTGTGTGTCTTATAATTACAATAATGTGATTGGTGGCGGTTGCTGCTCGTCGGATAGTGCTGAAAAAGGAGCCACATTATCCACGCCGTTGGAGCAGAAGGACAACTCGGATATCAGAGCAGTATTTGAACCTGAAATTGGGGATTTGTGGACCGATGAAAACATATGGTTCTTGCAACAGCAGCTTGCTGATGAGTTGTGA 783 0.4419 MEMEYTTEGVHHIMRNLSDCGSSATNGSEDDMLIKKGPWTEEEDSVLSNYITIHGEGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDTLRYVWMPRLMEQIQASCGNTSSSQTTTHSTLSLASSYSSSGFHAQTSLSDSCVSYNYNNVIGGGCCSSDSAEKGATLSTPLEQKDNSDIRAVFEPEIGDLWTDENIWFLQQQLADEL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2235 260 SMART sant 35 75 IPR001005 -
Aev05g2235 260 SMART sant 78 126 IPR001005 -
Aev05g2235 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Aev05g2235 260 Gene3D - 35 78 - -
Aev05g2235 260 Pfam Myb-like DNA-binding domain 36 73 IPR001005 -
Aev05g2235 260 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
Aev05g2235 260 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Aev05g2235 260 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 24 206 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aev05g2235 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 73 IPR017930 -
Aev05g2235 260 ProSiteProfiles Myb-like domain profile. 31 73 IPR001005 -
Aev05g2235 260 PANTHER TRANSCRIPTION FACTOR MYB108 24 206 - -
Aev05g2235 260 CDD SANT 38 73 IPR001005 -
Aev05g2235 260 Gene3D - 83 124 - -
Aev05g2235 260 SUPERFAMILY Homeodomain-like 34 120 IPR009057 -
Aev05g2235 260 CDD SANT 83 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2235 Aev-Chr5 22553532 22555420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2235 29 256 MYB Transcription Factor Family AT2G47190 49.225 8.66e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g2235 Myb_DNA-binding 2.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2235 K09422 - gmx:778040 304.293