Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2192 ATGGCAACCATTGCCACCTTCTTCAACAAGTTCTTCTCCCTCTTCATCATCCTCTTTGTCCACCTTGGCTGCTTCATCTTCACCACCACAAGGCAAGAACACAGAAACAACAACGACAACCACTTGGTACCATCATCAAAAAAACGCAAAATCTCACCTTTGTCACAACCCTCATCCCCTTCCCACCCCAAATTCAAGACCCACAAAGCCCTCTCTTCTTCTTGGCATTTCATCAAACACATCTTCTCCACCAAACCCAAAATCACCACCACCACCACCCATTCCTCACCCCAGTCCACCACCACAACCACCACTTCAACCACCGCCGCCGCCAGAACCTCCCAAACCTCCCAAACCTCCCTACTTTCCCTCTCCCAACCGGACCCGAATTTCCCGGACCCACCCCGCCGCAAAAACCCACCCGAATCCGACATAACCTCAGACGACACGAACACCTTCTTCCCTCTCCGAAACGACATCTTCCCGTGCACCGCGTGCGGCGAGATCTTCCAGAAGCCACTCCTATTGGAAAATCACCAATCTGCAAAGCACGCGGTTTCGGAGCTACGAGGATCCGACCCGGGCCATAACATAGTCCAAATAATCTTCAAATCGGGTTGGCCGGAAACCATAAAAAGTCTCCCGAAAATCACCCGAATCCTCAAGATCCACAACAGCCAGAAGATCCTTTCGCGATTCGAAGAGTATCGCGAGACCGTGAAGTCCAGGGCGGCGCGTCACCTCACGCGCCGCCGCGACGAGCGCTGCGTCGCCGACGGGAACGAGCTCATGAGGTTTCACTGTTCCACCTTTTTATGCGATTTGGGACTTAATGGGGATTCTTCGATTTGTTTGCAGCAATTTTGTAATATATGTGGGATTATTAAATCGGGATTTTCGTCCAAGCTGGATGGGATTTCGACGTTGGCATCCAGCTGGAGGGCACACGTGTCGATCCCTGATGATGTGGAGAGCGAGTTTAGGTTTATGAATGTGAAGCGGGCCATGCTAGTGTGCCGTGTGATTGCGGGTCGGGTTGGATCGGATTTGGACGAGGTAGAGAAGGAGGACGGCGGTGGGTTTGATTCGGTGATGGTGCGCGTAAATGGCGACGGCGGTGCCGGTGGTGGCGCAAGTGGAGTGTACACACGGCTTGATGAGGAGGAGCTTTTGGTGTTTAATCCTAGGGCTGTGCTTCCTTGCTTTGTGATTGTGTATAGTGTTTAA 1227 0.5232 MATIATFFNKFFSLFIILFVHLGCFIFTTTRQEHRNNNDNHLVPSSKKRKISPLSQPSSPSHPKFKTHKALSSSWHFIKHIFSTKPKITTTTTHSSPQSTTTTTTSTTAAARTSQTSQTSLLSLSQPDPNFPDPPRRKNPPESDITSDDTNTFFPLRNDIFPCTACGEIFQKPLLLENHQSAKHAVSELRGSDPGHNIVQIIFKSGWPETIKSLPKITRILKIHNSQKILSRFEEYRETVKSRAARHLTRRRDERCVADGNELMRFHCSTFLCDLGLNGDSSICLQQFCNICGIIKSGFSSKLDGISTLASSWRAHVSIPDDVESEFRFMNVKRAMLVCRVIAGRVGSDLDEVEKEDGGGFDSVMVRVNGDGGAGGGASGVYTRLDEEELLVFNPRAVLPCFVIVYSV* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2192 408 SUPERFAMILY ADP-ribosylation 187 407 - -
Aev05g2192 408 ProSitePatterns Zinc finger C2H2 type domain signature. 163 184 IPR013087 -
Aev05g2192 408 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 407 - -
Aev05g2192 408 Gene3D - 186 407 - -
Aev05g2192 408 MobiDBLite consensus disorder prediction 35 66 - -
Aev05g2192 408 MobiDBLite consensus disorder prediction 88 150 - -
Aev05g2192 408 ProSiteProfiles Zinc finger C2H2 type domain profile. 161 189 IPR013087 -
Aev05g2192 408 MobiDBLite consensus disorder prediction 88 127 - -
Aev05g2192 408 PANTHER NUCLEIC ACID BINDING PROTEIN 3 407 - -
Aev05g2192 408 MobiDBLite consensus disorder prediction 49 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2192 Aev-Chr5 21704061 21705287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2192 75 408 C2H2 Transcription Factor Family AT2G29660 55.814 8.47e-109 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev05g2192 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2192 - - aip:107608029 579.711