Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2163 ATGAAACTAGACTTTGGGGAGAATCATGGGTATATTGTTGATGGCTACACACAACTTATCAACCTTTTTAATCTTTGGTATGGTGGGTGGCTGAAGGCTTCATACATTGATGATGAGTTTGTCTTAAAGGTGGATTTTCACGGGAAAAATATATCTGAACAATCCAGCGCTCATGGTCGGAGGTTAGATATTGGTAATGATGTTATTGACCTAACCCAAAATGAAGATGATTCCATGCAGGTGGTTTTTATTAACCAAGCTAAGAGTAATAGACTGTTTTTACCAATTGGTTTCGTCCACCTTGCATTTACACACCGTGTCACTCCTCTTCGTTTAACGGATCCTAATGGCAATATCCACTACATTGATCTCACATGGAGTAATATGAGACCAAAAGAAGTTTATCTTGGAAAAGGGTGGCATCGGTTTTGCCAAGCCAATAACATTCAGCCAGGCACACTTATTCATTTTAAGGTTCCTGTTCATGATAAGTGCTCTGTGGTTGCCGAGATTGTTAAGAAGGATTAA 528 0.392 MKLDFGENHGYIVDGYTQLINLFNLWYGGWLKASYIDDEFVLKVDFHGKNISEQSSAHGRRLDIGNDVIDLTQNEDDSMQVVFINQAKSNRLFLPIGFVHLAFTHRVTPLRLTDPNGNIHYIDLTWSNMRPKEVYLGKGWHRFCQANNIQPGTLIHFKVPVHDKCSVVAEIVKKD* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2163 175 ProSiteProfiles B3 DNA-binding domain profile. 77 175 IPR003340 GO:0003677
Aev05g2163 175 Gene3D - 70 174 IPR015300 -
Aev05g2163 175 Pfam B3 DNA binding domain 85 159 IPR003340 GO:0003677
Aev05g2163 175 SUPERFAMILY DNA-binding pseudobarrel domain 88 159 IPR015300 -
Aev05g2163 175 CDD B3_DNA 85 158 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2163 Aev-Chr5 21227863 21229014 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev05g2163 B3 1.8e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2163 - K01409 pfa:PF3D7_1030600 38.891