Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2138 ATGAATTTTGACTTTTCAGATTTAAATGATACAAGTGTTCAAGTTACTAATGAAGATTATAACATTCATCATACTCCTCATATTGGGATGGAATTCACCTCTATTCAAGATGCTAAACTGTACTACAAAGCATTTGCTGGGCAAGAGGGTTTTTCATTTCGTACTCGTTCAAGTAAGCCGAACTACTGTATTTATGTTTGCTCTAATGAAGGATATCACAAAATCAAGAGTAATACTAAAGAAGATGGCAATGAGATGACAAAGAAAAAAAGGAGATGCTCAACATCAATAACAGGGTGCACTGCATCAATTACCGTTTCAAAAGCCAAAAAAGAAGATATGTGGTGCATTACTTCTTTTAATAATGATCATAATCATGTTATGTATGATAAAGCAGTTGATAGTCGTTATGAGAAAGAAAGGAAAGAAGATTTTGAATCCAGACATCGGTTGCGAATATTGAGTATTGGATCGAAAATTGAAGAGCATGCAGCATCAATTTATACCAGAAATATTTTCCTGAAGTTTCAAGAAGAGCTTGCAAAGGTAAACAAATTTATGAAGGAAAAGATCGAGAAGAATGAGTCTCAATACATCTACAAGCTTTACGAATTCATGGGAATATTATGTCGCCACATCCTCGTCATTTTCCAAGCAAAAAATATTGTGCAAATTCCAAGTCATTACATTTTACATCGTTGGACCAAAGATGCTAATAGTGGAAATACATCTAATTTGTTTGAAAAGAGTTCGGCTGCACATGACAAACATGCCTCGGCTATTTTGCGCAACAGATATGTTCATCATCAAGCTAGCTTGTTGGCAGATCTTGCAGAGAAGTCTGAAGATATTTACACTTATATTGTTACAAAGTTAGAAGAAACATGCATAACAGCTACTAGAATGGAAGCTGAGATGGATAAAGGTGTGAATGTAGAGATCATGGTTGCAAATACAAGTTGTCAAGATGGAATGAATGCTCTACTCCAAAGTGAATCTCCTAAATGGCATATCAAAGATCCAAATATATCTCAAACTAAAGGGAGAAAGAAAGACAACTTTAAAGAAACTGAAGTTGGAAGAATCAAAGGAGGTCTGAAATGTTTTGACTAA 1113 0.345 MNFDFSDLNDTSVQVTNEDYNIHHTPHIGMEFTSIQDAKLYYKAFAGQEGFSFRTRSSKPNYCIYVCSNEGYHKIKSNTKEDGNEMTKKKRRCSTSITGCTASITVSKAKKEDMWCITSFNNDHNHVMYDKAVDSRYEKERKEDFESRHRLRILSIGSKIEEHAASIYTRNIFLKFQEELAKVNKFMKEKIEKNESQYIYKLYEFMGILCRHILVIFQAKNIVQIPSHYILHRWTKDANSGNTSNLFEKSSAAHDKHASAILRNRYVHHQASLLADLAEKSEDIYTYIVTKLEETCITATRMEAEMDKGVNVEIMVANTSCQDGMNALLQSESPKWHIKDPNISQTKGRKKDNFKETEVGRIKGGLKCFD* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2138 370 Pfam FAR1 DNA-binding domain 41 128 IPR004330 -
Aev05g2138 370 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 7 128 - -
Aev05g2138 370 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 200 314 - -
Aev05g2138 370 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 128 199 - -
Aev05g2138 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 128 IPR031052 GO:0006355
Aev05g2138 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 200 314 IPR031052 GO:0006355
Aev05g2138 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 128 199 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2138 Aev-Chr5 20875389 20877539 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev05g2138 FAR1 7.5e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2138 - - qsu:112003602 205.682