Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2098 ATGGTTAGCGTAATAAAGGCAGCAATTGGAGATGCTGTGTTGACTTTTATGTGGGTCGCCGTCTCATCGATGTTTGGCTTAATGACCAACTCCATAATGAATGCGCTTGATATTCATAACTACTTCGTATCCTACAATGGTTTTGATTACCCGTCTATTATAATAACCACTTTAGTAATATTCATCCATGTCTTAATATTCACCATTATTGCCAATGCCTTGGGTGGTGCGAGCTTCAACCCAACGGGAAATGCTTCGTTCTATGCAGCCGGTCTTGGCTCAGACTCCCTCTTCTCAATGGCTCTTCGATTTCCTGCTCAGGCCCTCGGTGCAGTGGGTGGTGCTATGGCAATTATGGAGGTAATGCCATTGAAATACAAGCACATGATTGCAGGGCCTGCTTTGAAGGTTGACCTGCATACTGGAGCCATTTTAGAAGGTTGTTTTACATTTGTAATCAGTTTTGTTGTTCTCTTTATCATGCGTAAAGGTCCTCGTAGTGAGTTGGGCAAGACCTGGTTGCTGGCAATGTCGATTGTAGCTTTGATCGTTCCTGGTTCTGATTACACAGGGCCGGCCATGAATCCTGCAATTGCCTTTGGTTGGGCATACTTAGACAATTGGCACAACACATGGGACCATTTCTATGTTTACTGGATTTTCCCTTTCATTGGTGCAATATTGGCTGCATGGTTGTTCCGCATTGTCTTTCCTCCACCAGTAATAAAGCAGAAGAAAGCTTGA 744 0.4395 MVSVIKAAIGDAVLTFMWVAVSSMFGLMTNSIMNALDIHNYFVSYNGFDYPSIIITTLVIFIHVLIFTIIANALGGASFNPTGNASFYAAGLGSDSLFSMALRFPAQALGAVGGAMAIMEVMPLKYKHMIAGPALKVDLHTGAILEGCFTFVISFVVLFIMRKGPRSELGKTWLLAMSIVALIVPGSDYTGPAMNPAIAFGWAYLDNWHNTWDHFYVYWIFPFIGAILAAWLFRIVFPPPVIKQKKA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2098 247 PANTHER AQUAPORIN SIP1-1 3 247 IPR044222 GO:0015250
Aev05g2098 247 SUPERFAMILY Aquaporin-like 3 240 IPR023271 -
Aev05g2098 247 Pfam Major intrinsic protein 3 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev05g2098 247 PRINTS Major intrinsic protein family signature 176 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev05g2098 247 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev05g2098 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev05g2098 247 PRINTS Major intrinsic protein family signature 99 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev05g2098 247 PRINTS Major intrinsic protein family signature 60 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev05g2098 247 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev05g2098 247 Gene3D Glycerol uptake facilitator protein. 1 245 IPR023271 -
Aev05g2098 247 PANTHER AQUAPORIN SIP1-1 3 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2098 Aev-Chr5 20344591 20346907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2098 2 246 Major Intrinsic Protein MIP AT5G18290 54.472 3.78e-84 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2098 K09875 - gmx:100788738 375.17