Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2070 ATGGCTCACCCATCGTCAACACTGCTGGCGACACCCGTGGCGGTAGCAGCAGCGGAGTCAGTTGCCAGATCCAGCAGTCGCCGACTCCTCTTCGTATCCTCGTGGGCAAGCGGAGCAGCAGCAACAACGACGACCAGAGCAGCGGCGACGCAAGAAAGTGAAATTGAGTTTGAAAAAGAGTACCTTTTCGCCGGTGAGGGAGTTGGTGACGAAACGGGCATGGTCCCAACGAGTGGTGGTAGCAATGGCGGAGTAAGTCGCCAGATCCAGCAGCCGCCGACTCCTCTTCGTATCCTCCTCGGCAAGCGGAGCATCAGCAACAACCACGACCATGGCAGCGGCAACGCAAGGCAGCCCCACGAGGGTCGCCGGCAGCAGCAGCCTCTGGCCCAGGAAGGACTTGCGATGGCTGGGCTTCTTGAGGGACCTGATCGCGTGAGAATGGGGTTTATAAGTGATGCAACTTTATCTTCACATTCATTAATGTCTTTGGACTCTAAGTCAACTTACTCTCTTGAGGAGGATTTTTTGTCTCTCACCCAACACAAGACTATTGTTGAACTAAATGATGGTAATCAGGTTGGAACATTTGCTATAATTGCTACTGTGAAAGACATAGATCCCAAACTTGTTTGGTGGTATAAGTCATGCAAAAAATGTTTTGGTGGTTTGAGAGTTGACGAGGGTTTGTTTCTTTGCAAAAGATGCAAGACTTATGAGCGTGTGTTTACTCCAAGGTATAGTATTCGACTAAGGGTTGTTGATGACACGGACTCTACCACTTTTGTATTGTTTGATCGTGAAGCATCAAAATTTCTAAATATTTCTGCTTCAGACCTTCGTCTCAAACACTCTACCAAGGGAGGTGATGTAAAGGAAATACCGGACGAGCTTACTGCATTCAAGAATAAGAAATTTCTCTTCAAGGTCCAAGTGAAGCTTCAAGATTTCAACTCCTATGAACCATTTGTAATCCATGTGTCCAAGCTTTGTTATGATGATACTTTAATTGCAGCTTTTGAACGCAAATTCATTTTAGATTCTATGAGTGGCTCTTCTTCTTGA 1065 0.4676 MAHPSSTLLATPVAVAAAESVARSSSRRLLFVSSWASGAAATTTTRAAATQESEIEFEKEYLFAGEGVGDETGMVPTSGGSNGGVSRQIQQPPTPLRILLGKRSISNNHDHGSGNARQPHEGRRQQQPLAQEGLAMAGLLEGPDRVRMGFISDATLSSHSLMSLDSKSTYSLEEDFLSLTQHKTIVELNDGNQVGTFAIIATVKDIDPKLVWWYKSCKKCFGGLRVDEGLFLCKRCKTYERVFTPRYSIRLRVVDDTDSTTFVLFDREASKFLNISASDLRLKHSTKGGDVKEIPDELTAFKNKKFLFKVQVKLQDFNSYEPFVIHVSKLCYDDTLIAAFERKFILDSMSGSSS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2070 354 Pfam Replication factor-A C terminal domain 197 320 IPR013955 -
Aev05g2070 354 PANTHER REPLICATION FACTOR A 1, RFA1 162 340 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev05g2070 354 MobiDBLite consensus disorder prediction 70 91 - -
Aev05g2070 354 Gene3D - 168 336 IPR012340 -
Aev05g2070 354 MobiDBLite consensus disorder prediction 75 91 - -
Aev05g2070 354 MobiDBLite consensus disorder prediction 106 125 - -
Aev05g2070 354 SUPERFAMILY Nucleic acid-binding proteins 180 323 IPR012340 -
Aev05g2070 354 CDD RPA1_DBD_C 183 318 IPR013955 -
Aev05g2070 354 PANTHER BNAC07G49340D PROTEIN 162 340 - -
Aev05g2070 354 MobiDBLite consensus disorder prediction 104 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2070 Aev-Chr5 19966583 19975230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2070 197 319 Core DNA Replication Machinery Family AT5G08020 29.365 1.23e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2070 - - adu:107490971 177.948