Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1997 ATGAGTGACACCATGGAGGAAGATAGGAATGAGAATCATTCTTACATGAGTGATGATATGGCATATGTAGATGATGAAATTGATAACTTTTGTGTGGATTCTTCAGAAGACATTGCTAGAATTGAGATGATGAACATATCCAGAGGTGATGTGTATAGATTTAATTTTCGTGAAATTTTACTAGCATTCCAATTTTACAACTTATATGCTAGGACAAAGGGATTTAGTGTTAGAAAGAGTAAGGCACGCAAGAACAAGAACAATGAATTAGTGAAACAAACATTTGTTTGTTCTTGTGAGGGTTTTAGAGATGAGAAATATTTTAACATTGAAAATCGTGTAAGGCAACCAAAACCTGAGACAAGGTGTGGTTGTATGGCTCGGATACAAGTGCAGTTTGAAGGGGCATCAAAGAGATGGATCGTGAAAATTTTTTTTGATGAGCACAATCACGAGCTTGTTGACCCTAAATTTGTTGGAATGCTTCGATCTCAGAAGAAAATGAGTGAGGCAGACATTGGGCAAATGAATAGCATGAGAAGTGCAGGGATTAGCACACCATTGATCTTTGGTTCATTAGCTATGCAAGCCGGTGGGTACCAGCATGTTGGTTTTGGAGTAAGAGACATGTACAACCAAGTTGCAAAGCAAAGGCGACAATTACCCGTCGATGTAGGATCTGCGATGATGTTTCTTGAGAAGATGGCATCTACCGATCAAAGCATGTTTGTCAAGCATGAGGCTGATGAAGAGCATGTGTTGCGACATATATTTTGGAGTGATGGTGTTAGCCAACTTGATTATCAGTTGTTTGGTGATGTTATTGCTTTTGATGCTACGTACAAGAAAAATAAATATAAGTGTCCATTAGTTATATTTTCTGGGCAAAAGTGGAAGGAAATGGTTAATGAATTTGGAGTTCATGATCGTCCATGGATTTTAGACCTATATGAAAAAAGGCACATGTGGGCTACAGCATACATAAGGGGGAAGTTTTTTGCTGGGTTTAGGACAACTTCTCGGTGTGAGGGTTTGCATTCTCAGCTTGCAAAGTATGTAAAGTCGCAATACAATTTGACAGATTTCTTACAACACTATCATCGTTGCCTAGATCGTTTGCGGTATAACGAGTTAAAGGCAGATTATGATTCTATAAATGGAGAGCCTATGATGCAAACTCCTTTTGAAAATTTGGAGAGATTTGCATCTAAGGTGTACACTCGAGCTGTATTTTCTATGTTTCGTACTATGCTTGATAGAGCTAGTGTTGCGAAGGTTAAGTATGAGAAAGGAACGAGTTCTTGTGTCATCTATGGCGTTTCAAGTATTGAACAGGTGGATGACAAAAGTGGTTTGATGTCAAATTCATTGCAAGTGAGTCGACAGGCATCTTTGGCAGAGTGGAGCAATCAAGTGGTGAAGTTGGGATGTCAAAAAAGTGCACATTTCTATGGTGTAACAGACACAATGATTGATCTTATTAAGTGGATGAGAGAGGACAATGATGTGAATAATGAGGAGGATGCTTCAACTGTAGTTCAGGAGGATATTGAGGATAACGATTTAAGGGAACCCCAAGTTGTTCGAACAAAGGGTTGTGCAAGTAAGGGCTCAAGGAGGAGATCATATCGTTGTTCTATATGTAAGGATGAAGTCACAACCGGATCTCTTGTCCTGTTCGCAATCATAATGAGAACATTACACAATTAA 1710 0.3883 MSDTMEEDRNENHSYMSDDMAYVDDEIDNFCVDSSEDIARIEMMNISRGDVYRFNFREILLAFQFYNLYARTKGFSVRKSKARKNKNNELVKQTFVCSCEGFRDEKYFNIENRVRQPKPETRCGCMARIQVQFEGASKRWIVKIFFDEHNHELVDPKFVGMLRSQKKMSEADIGQMNSMRSAGISTPLIFGSLAMQAGGYQHVGFGVRDMYNQVAKQRRQLPVDVGSAMMFLEKMASTDQSMFVKHEADEEHVLRHIFWSDGVSQLDYQLFGDVIAFDATYKKNKYKCPLVIFSGQKWKEMVNEFGVHDRPWILDLYEKRHMWATAYIRGKFFAGFRTTSRCEGLHSQLAKYVKSQYNLTDFLQHYHRCLDRLRYNELKADYDSINGEPMMQTPFENLERFASKVYTRAVFSMFRTMLDRASVAKVKYEKGTSSCVIYGVSSIEQVDDKSGLMSNSLQVSRQASLAEWSNQVVKLGCQKSAHFYGVTDTMIDLIKWMREDNDVNNEEDASTVVQEDIEDNDLREPQVVRTKGCASKGSRRRSYRCSICKDEVTTGSLVLFAIIMRTLHN* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1997 569 Coils Coil 563 569 - -
Aev05g1997 569 Pfam FAR1 DNA-binding domain 64 154 IPR004330 -
Aev05g1997 569 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 297 433 IPR031052 GO:0006355
Aev05g1997 569 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 295 IPR031052 GO:0006355
Aev05g1997 569 PANTHER OS03G0181600 PROTEIN 297 433 - -
Aev05g1997 569 PANTHER OS03G0181600 PROTEIN 61 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1997 Aev-Chr5 18865617 18867787 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev05g1997 FAR1 1.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1997 - - adu:110272483 402.134