Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1947 ATGTCAGCGGCTTCGCCATCTCCGGCGGCTTCCACCGCCGCGCCACCGTCACAAACTCCGTCCTCTACCACCACGTCCCCTCCCTCTCAACAACCACCCTCTTCACCTGCTCCTAACGCTTCAACTTCACCACCGCCATCTCAGTCGTCACCTCCGGAAACTCCGCCATCCCCTCCTCCCGCCGTGCCGCCGCCAGCGCAACCGTCACCACGGCCTCAAGCTTCAATTCCTCCCCCTTCGTCAGGAAACTCACCTCCACTGCCACCGCCTCCAAGAGCCCCACCTCCAACCCCAAACCCAGCCCCTCCTCCATCGCCGCCGCCATCACCACCACCACCAGTTCCGCCAAGGAGCTCTCCATCACCATCTTCAGCCACACCACCATCTAACCCCGCCCCCATACCTCCATCTAACCCTCCTAAGAGCCCATCCCCACTGCCACCATCGCCAGCTCCCAAGAATTCACCCCCTCCTCCTACTCCAGCTGCCGTTCCGCCATCTCGAGGGTCACCTCCACTGCCACAGCCTACGCCATCCCCTAAAAGCTCGCCGCCACCGGTGAATTCACCCCCAATGCCAGCAGCCGACAAGTCCCCTACCACACCCACTTCTCAGCCTGCTCCTCCTTCAAGTTCTACACCGAAGTCATCTTCCCCGCCACCACCGATCCGATTGGCGCCGCCTCCGGCGTCGCTTTCTGCTTCGCCACCAACATTCCAAAATGGATCAGAGAATTCAAGCCCTGGAACTGGAAGTAGTGGTGGAATTGGTACTGGTGCTTTGGTGGCTATTAGTGTAGTGGCTGGAGTTCTGTTGCTTGGCTTCATTGGAGTTGCTATTTGGTGCATGACAAGGAGGAAGAACAATGTGCCAAGGAATGGTGGTTATGTCATGCCATCAATTCCTGCCTCCTCTCCTGAATCAGATTCGTCCTTCTTTAAGACACATTCTTCAGCTCCTCTTGTACAAAGTGGTTCTGGCAGTGATGTTGTGTATACACCATCTGATCCTGGTGGGCTAGGAAACTCAAGGCCATGGTTTTCGTATGAAGAATTAATCAAGGCCACAAATGGTTTCTCGACTGAGAATCTCTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGAAACTTACCTGATGGGAGAGAGATAGCAGTCAAACAGCTGAAAATTGGTGGAGGTCAGGGAGAGAGAGAATTCAAAGCTGAAGTCGAAATTATCAGTCGCATACATCATCGCCATCTGGTTTCTTTGGTGGGATACTGCATCGAAGATAACAGACGACTGCTTGTCTATGACTATGTCCCTAATAATAACCTCTATTTTCATCTACATGGGGAAGATAGGCCTGTGTTAGAGTGGGCAAACCGTGTTAAAATCGCAGCTGGTGCAGCACGAGGAATTGCTTATCTCCATGAAGACTGCAATCCTCGGATTATTCACAGGGATATCAAGTCATCAAACATTCTTTTAGATTACAACTTTGAAGCTCGAGTCTCCGATTTTGGGCTAGCCAAGTTAGCTCTTGATGCAAATACACATATAACCACACGTGTCATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCATCCAGTGGCAAATTGACCGAGAAGTCTGATGTATATTCTTTTGGAGTTGTGCTTTTAGAGCTAATTACTGGACGGAAGCCAGTGGATGCATCTCAACCCTTGGGAGATGAGAGTTTAGTTGAATGGGCTCGACCATTGTTGAGTCATGCACTTGATAGTGAGGATTTTGAGAATTTGACAGATCCAAGGTTAGACAACAACTATGTTGAAAGTGAAATGTTTTGCATGATTGAAGTTGCTGCTGCTTGTGTGCGGCATTCAGCTGCAAAGAGACCTCGTATGGGACAGGTTGTTAGGGCTTTTGACAGCTTAGCAGCAACTGATATAACAAATGGAATGCGAGTTGGAGAAAGCGAGGCTTTTGACTCTGCGCAGCAATCTGAAGAAGTAAGATTATTTAGGAGGATGGCATTCGGTGATCAAGATTATAGCACAGACTTTTTTAGCCATGCTAGTTTTAATACGTGA 2061 0.5002 MSAASPSPAASTAAPPSQTPSSTTTSPPSQQPPSSPAPNASTSPPPSQSSPPETPPSPPPAVPPPAQPSPRPQASIPPPSSGNSPPLPPPPRAPPPTPNPAPPPSPPPSPPPPVPPRSSPSPSSATPPSNPAPIPPSNPPKSPSPLPPSPAPKNSPPPPTPAAVPPSRGSPPLPQPTPSPKSSPPPVNSPPMPAADKSPTTPTSQPAPPSSSTPKSSSPPPPIRLAPPPASLSASPPTFQNGSENSSPGTGSSGGIGTGALVAISVVAGVLLLGFIGVAIWCMTRRKNNVPRNGGYVMPSIPASSPESDSSFFKTHSSAPLVQSGSGSDVVYTPSDPGGLGNSRPWFSYEELIKATNGFSTENLLGEGGFGSVYKGNLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIEDNRRLLVYDYVPNNNLYFHLHGEDRPVLEWANRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFEARVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSHALDSEDFENLTDPRLDNNYVESEMFCMIEVAAACVRHSAAKRPRMGQVVRAFDSLAATDITNGMRVGESEAFDSAQQSEEVRLFRRMAFGDQDYSTDFFSHASFNT* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1947 686 SMART serkin_6 359 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1947 686 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Aev05g1947 686 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 72 681 - -
Aev05g1947 686 MobiDBLite consensus disorder prediction 235 253 - -
Aev05g1947 686 MobiDBLite consensus disorder prediction 1 253 - -
Aev05g1947 686 MobiDBLite consensus disorder prediction 1 25 - -
Aev05g1947 686 MobiDBLite consensus disorder prediction 26 234 - -
Aev05g1947 686 SUPERFAMILY Protein kinase-like (PK-like) 341 630 IPR011009 -
Aev05g1947 686 Pfam Protein tyrosine and serine/threonine kinase 361 630 IPR001245 GO:0004672|GO:0006468
Aev05g1947 686 MobiDBLite consensus disorder prediction 308 328 - -
Aev05g1947 686 Gene3D Transferase(Phosphotransferase) domain 1 435 652 - -
Aev05g1947 686 Gene3D Phosphorylase Kinase; domain 1 340 434 - -
Aev05g1947 686 ProSiteProfiles Protein kinase domain profile. 359 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1947 686 CDD STKc_IRAK 365 635 - -
Aev05g1947 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Aev05g1947 686 PANTHER BNACNNG34790D PROTEIN 72 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1947 Aev-Chr5 17934556 17942438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1947 247 628 Trihelix Transcription Factor Family AT1G68690 71.354 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aev05g1947 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1947 - - gmx:100794393 775.393