Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1866 ATGCTGAATCACCATAACCATAACCGTCATCATCAATATCATCATCATCAGATGGAGAAGTATCCGAGAGATCTGCTTCAGAGATTCGTCGTGTCAAGTGGTCGGGGTGGTGGTGGTGGTGGCGGTGATGAAAACACACACACGGAGCAGCAGCAGCAACACCATCATCACCACCACCACCGCCACCATCAACATCAACAGCAACAGCATCATCAGGATCAAGTTGAGCAGAATGAAGAAGGAGGAGATGATGATGATGAGGGTGATGATGAGGGGGTTGAGCTGAATCTAGGGCTCTCCTTAGGGGGAAGATTCGGCGTTGACAAGCACGCGAAAAATAAGAAGCTCACGCGCTCTTCATCTGTTGTTGGGACAATGCCTCTGCTCAGGGAGGACCGAGCGCCGGAGCCGCCACAGCCAGCGGCTTACCCCGCCGTCCTCATGAGGACGTCCTCGCTTCCTACGGAGACCGAGGAGGAGTGGCGGAAGAGGAAGGAGCTGCAGATGCTCCGCCGCATGGAGGCCAAGAGGAGGCGGTCGGAGAAGCAAAGAGTCTCCCGGTCGGAGAGAGAATCCGCCGCCACCGTTGGAACCAACGCCGGTGGTGGAAGTTTGGAGGAGGTTGAGGGTGCAAGTGCAGCAACAGTGGGGTCTCTGAATAGGTTTGGTACTTCTTCAATTCCACCTTTTGGGATGCAAAATTGGGGTGGTGGAAGGCAAGTTGTTCTTAGTGATGTGTTGGGGAGAGGCAAACTTGGAAGTGGCGGCGGTAGCGGTGGCGGGTTTCAGGGTTTGTTTACTCAACCATCTTCTCAGGGTTCAGCAGATTCCCAAGGTGGAAGCTCTTCTTCAGTTTCTGAATTGGAGAGCAAGCCTTTTCTTGGACCAAGCAGTGGTGCCGAAGCTAGAAGTCCTGCTAGTAATCAGTCGATACAAGAAAGAAGCAGCCAGGATGTCGGGGGTTCATCGGGGACGAAGACAGCTGAGAGTATAAGCAGAACTTCCAAAGCTGAGGTGGAGAATCTATCTAAGAAACCCAATCCTGCCAATAATAAGGGGAGGGAAATCGGAACAAACTCAATGGAAGATATGCCTTGTGTATTTACAAAAGGCGACGGTCCGAACGGAAGGAGAATTGAGGGAATTTTATATAAATATGGTAAAGGAGAGGAAGTGAGGATAATGTGTGTTTGCCATGGAGATTTTCTGTCTCCAGCAGAGTTTGTTAAGCATGCTGGTGGTAGTGATGTAGCTCACCCACTTAAGCACATTGTTGTATACCCTTCTGCTTCTCCCTTTTTATGA 1305 0.5088 MLNHHNHNRHHQYHHHQMEKYPRDLLQRFVVSSGRGGGGGGGDENTHTEQQQQHHHHHHHRHHQHQQQQHHQDQVEQNEEGGDDDDEGDDEGVELNLGLSLGGRFGVDKHAKNKKLTRSSSVVGTMPLLREDRAPEPPQPAAYPAVLMRTSSLPTETEEEWRKRKELQMLRRMEAKRRRSEKQRVSRSERESAATVGTNAGGGSLEEVEGASAATVGSLNRFGTSSIPPFGMQNWGGGRQVVLSDVLGRGKLGSGGGSGGGFQGLFTQPSSQGSADSQGGSSSSVSELESKPFLGPSSGAEARSPASNQSIQERSSQDVGGSSGTKTAESISRTSKAEVENLSKKPNPANNKGREIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGDFLSPAEFVKHAGGSDVAHPLKHIVVYPSASPFL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1866 434 Pfam Putative nuclear localisation signal 147 290 IPR032310 -
Aev05g1866 434 PANTHER AFP HOMOLOG 2 18 431 IPR031307 GO:0007165
Aev05g1866 434 MobiDBLite consensus disorder prediction 78 93 - -
Aev05g1866 434 MobiDBLite consensus disorder prediction 254 364 - -
Aev05g1866 434 Pfam Ethylene-responsive binding factor-associated repression 89 124 IPR012463 -
Aev05g1866 434 Coils Coil 163 183 - -
Aev05g1866 434 MobiDBLite consensus disorder prediction 173 205 - -
Aev05g1866 434 MobiDBLite consensus disorder prediction 261 291 - -
Aev05g1866 434 MobiDBLite consensus disorder prediction 112 141 - -
Aev05g1866 434 MobiDBLite consensus disorder prediction 31 96 - -
Aev05g1866 434 MobiDBLite consensus disorder prediction 52 67 - -
Aev05g1866 434 PANTHER NINJA-FAMILY PROTEIN AFP1 18 431 - -
Aev05g1866 434 MobiDBLite consensus disorder prediction 301 337 - -
Aev05g1866 434 MobiDBLite consensus disorder prediction 173 189 - -
Aev05g1866 434 Pfam Tify domain binding domain 392 425 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1866 Aev-Chr5 16616662 16620254 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1866 - - mtr:MTR_5g045370 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1866 05 16616662 16620254 Aev05g1866 05 16616662 16620254 ECH