Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1768 ATGGGGGATGAATCAAGGGCGCGTGAGGAAAGCACGCCAATGAATGACAACAACATGGAGGAAGAAGAAGTTCAACGAGTTGAAGAAAGAGATCCAGAAAGCAATCCCCTTAATGTGCCTCTACTCAAGAGGAACAGAACCCTCTCTTCCAATCCACTTGCTCTCGTTGGAGCTAAAGTTTCCTACATAGAAAGCTTGGACTATGAGATCAATGAGAACGATCTATTCAAGCAAGACTGGAGGACAAGATCAAGAGCTCAGGTTTTGCAGTACATATTCTTGAAATGGTCACTTGCCTTCCTTGTTGGGCTTCTTACTGGTATTATAGCCACTCTCATCAATCTCGCTATTGAGAATATTGCTGGCTACAAGCTTCTTGCCGTTGTTAAGTACATCCAAAACGAAAGGTACTTGACGGGTTTCCTATGTTTCACGGGCATTAATTTCGTATTGACATTCGTTGCTGCGTTCCTGTGTGTGTGGTTTGCACCCACAGCAGCTGGACCAGGAATACCTGAAATCAAAGCTTATCTAAATGGTGTTGATACTCCCAACATGTATGGTGCCACAACTTTGTTTGTCAAGATTATTGGAAGCATTGGAGCTGTGTCTGCAGGTCTAGATTTAGGAAAAGAAGGGCCATTGGTACACATTGGCAGCTGCATTGCTTCCTTGCTAGGCCAAGGAGGCCCTGACAATCACCAGATCAAATGGCTGTGGCTGCGGTACTTCAACAACGATCGCGACCGGCGAGATCTCATTACCTGTGGTGCTTCTTCAGGGGTTTGTGCAGCCTTCAGGGCCCCAGTTGGTGGAGTTCTATTTGCCCTTGAAGAGGTGGCAACCTGGTGGAGAAGTGCACTCCTTTGGAGAACTTTTTTCAGCACAGCTGTGGTTGTGGTGGTGCTTAGGACCTTCATTGAAGTCTGCCATGAAGGGAAATGTGGCCTTTTTGGGGAAGGAGGGTTGATCATGTTTGATGTGAGCAATGTGAGTGTGAGGTACCATGTCATGGATATCATACCTGTTGTAATCATTGGTGTCATTGGTGGAGTATTGGGAAGCCTTTATAACTATCTTCTACATAAGGTCCTCAGACTCTATAATCTCATCAATCAGCAAGGAAAAATATACAAGCTGCTTCTCAGTCTTTCAGTTGCAGTCTTCACATCAGTGTGCCAATATGGTCTCCCATTCCTAGTAACATGCACCCCTTGTGACCCATCACTTCCACAATCTGCATGTCCCACCAATGGAAGGTCAGGAAACTACAAACAATTCAACTGCCCAAGTGGCCATTACAATGACCTTGCTACTCTGTTGCTCACAACAAATGATGATGCAGTTAGAAACATATTCTCAAGCAACACTCCCCATGAATACCAACCCACTTCTCTCTTGATCTTCTTTGCACTCTATTGCATATTAGGACTCTTCACTTTTGGAATTGCTGTGCCTTCTGGGCTATTCCTCCCTATCATACTAATGGGCTCCGGTTACGGCCGCCTTCTCGGCATCCTCATGGGACCTCATACAAATATCGATCAAGGTTTGTTTGCGGTTCTCGGCGCCGCCTCTCTGATGGCTGGTTCTATGAGAATGACTGTTTCCCTTTGTGTGATCTTCCTTGAACTAACCAACAACCTTCTCCTCCTTCCAATAACTATGATTGTCCTCTTGATAGCCAAAACTGTTGGGGACAGTTTCAACCCAAGCATCTATGACATCATTCTGCACTTGAAAGGCCTCCCTTTCTTGGACTCGAATCCGGAGCCGTGGATGAGAAACCTCACAGTTGGAGAGCTAGTTGATGTGAAGCCAGCAGTTGTTACACTCCGGGGAGTAGAGAAAGTTTCCAATATAGTTGAGGCATTGAAGAACACTACACATAATGGGTTCCCTGTGGTGGATGATGATGTAGCGAATCCAACAAGATTGGTGAGTGAAGCAAAAGAGCTTCATGGAGTGATTCTTAGAGCACACCTGATTCAGGTGCTGAAGAAGAAGTGGTTCTTGAAGGAGAGAAGGAGAAGAGAGGAATGGGAAGTGAGGGAGAAGTTCACATGGGTTGAGCTTGCTGAGAGAGAAGGAAAAATTGAAGAGGTGGCTGTGACAAGGGATGAAATGGACATGTTTGTTGATCTACATCCTCTCACAAATACAACACCATTTACGGTGCTAGAGAGCATATCGGTTGCAAAAGCAATGGTCCTCTTCAGGCAAGTTGGACTTCGACATATGCTTGTTGTACCCAAGTATCAAGCGTCCGGGGTATCTCCTGTAATTGGCATCTTGACCCGGCAGGATCTACTGGCACACAACATTCTGACAGTGTTTCCTCATCTAGCAAAATCAAAAAAGAGGAATTAA 2370 0.4544 MGDESRAREESTPMNDNNMEEEEVQRVEERDPESNPLNVPLLKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKQDWRTRSRAQVLQYIFLKWSLAFLVGLLTGIIATLINLAIENIAGYKLLAVVKYIQNERYLTGFLCFTGINFVLTFVAAFLCVWFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNHQIKWLWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRTFIEVCHEGKCGLFGEGGLIMFDVSNVSVRYHVMDIIPVVIIGVIGGVLGSLYNYLLHKVLRLYNLINQQGKIYKLLLSLSVAVFTSVCQYGLPFLVTCTPCDPSLPQSACPTNGRSGNYKQFNCPSGHYNDLATLLLTTNDDAVRNIFSSNTPHEYQPTSLLIFFALYCILGLFTFGIAVPSGLFLPIILMGSGYGRLLGILMGPHTNIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYDIILHLKGLPFLDSNPEPWMRNLTVGELVDVKPAVVTLRGVEKVSNIVEALKNTTHNGFPVVDDDVANPTRLVSEAKELHGVILRAHLIQVLKKKWFLKERRRREEWEVREKFTWVELAEREGKIEEVAVTRDEMDMFVDLHPLTNTTPFTVLESISVAKAMVLFRQVGLRHMLVVPKYQASGVSPVIGILTRQDLLAHNILTVFPHLAKSKKRN* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1768 789 PRINTS Chloride channel signature 485 505 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1768 789 PRINTS Chloride channel signature 573 587 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1768 789 PRINTS Chloride channel signature 164 181 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1768 789 PRINTS Chloride channel signature 535 554 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1768 789 PRINTS Chloride channel signature 195 214 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1768 789 PRINTS Chloride channel signature 517 533 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1768 789 PRINTS Chloride channel signature 259 278 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1768 789 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 6 787 - -
Aev05g1768 789 Pfam Voltage gated chloride channel 152 566 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev05g1768 789 PANTHER CHLORIDE CHANNEL PROTEIN 6 787 - -
Aev05g1768 789 Gene3D - 591 778 IPR046342 -
Aev05g1768 789 CDD CBS_pair_voltage-gated_CLC_euk_bac 606 773 - -
Aev05g1768 789 MobiDBLite consensus disorder prediction 1 33 - -
Aev05g1768 789 CDD ClC_6_like 64 586 - -
Aev05g1768 789 PRINTS Plant CLC chloride channel signature 437 453 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1768 789 PRINTS Plant CLC chloride channel signature 69 77 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1768 789 PRINTS Plant CLC chloride channel signature 312 319 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1768 789 PRINTS Plant CLC chloride channel signature 280 288 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1768 789 PRINTS Plant CLC chloride channel signature 294 304 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev05g1768 789 Pfam CBS domain 721 771 IPR000644 -
Aev05g1768 789 MobiDBLite consensus disorder prediction 1 41 - -
Aev05g1768 789 Gene3D Clc chloride channel 87 588 - -
Aev05g1768 789 SUPERFAMILY Clc chloride channel 73 588 IPR014743 -
Aev05g1768 789 ProSiteProfiles CBS domain profile. 719 785 IPR000644 -
Aev05g1768 789 SMART cbs_1 608 667 IPR000644 -
Aev05g1768 789 SMART cbs_1 722 775 IPR000644 -
Aev05g1768 789 SUPERFAMILY CBS-domain pair 589 772 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1768 Aev-Chr5 15184187 15201231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1768 19 786 Ion Channels AT3G27170 77.706 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1768 K05016 - gmx:778094 1334.32