Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1742 ATGTTTGAAGATATTTCTAATGAGCTAGAACTGAGAATACAGAATTATCTCAGAGGTGGAGGTGCTGATTTGGAGGTTTTGAAAGATAAAAAGCTCAAGGGTCAACTAACTGTTAGAGAAAATTTATATGGACAATCTGCAAAAGCTGCTGCGAAAGCAGAAAAGTGGCTTATGCCCAGCGAGGGAGGTTATCTAGAGGCTGAAGGTATAGAGAAGACATGGAATATCAAGCAAGAGGCAATAGCACGGGAAGTAGACATTTCAAGCGCAAGGAAACAATATGATATTGTCTTACCAGAACTTGGTCCATATACTCTGGATTTCACTTCAAATGGCCGATATATGGCTGTTGGTGGCCGTAAAGGCCATCTGGGAATTGTAGACACGATGAATGTGAGCCTAATAAAAGAATTTCAGGTGGGTGAAACAGTGCGGGATGTGGTATTCTTGGGTCATAAGCTTGACTTTGCTGCTGCTCAGAAAAAGTATCTATATATCTATAATCGAGAAGGCACAGAACTTCACTGCCTCAAGGAACATGGTTCAGTGCTAAGGCTTCAGTTTCTGGAAAACCATTATCTCTTGGTTTCGATCAACAAATTTGGGCAGCTTCACTATCAAGATGTTACAACGGGTGAGATGGTTAATAATTTTCGAACTGGCTTAGGACGTACAAATGTGATGCAAGTGAATCCCTTCAACGGGGTTGTTGCTTTGGGTCACTCTGGTGGAACAGTTACAATGTGGAAGCCAACCAGTTCTGCTCCTCTTATCAAGATGCTGTGTCATCATGGGCCGGTATCGGCGCTAGCGTTTCACTCGAACGGCCACTTAATGGCCACTGCCGGACAAGACAAAAAGGTTAAGCTTTGGGACTTGAGGAAATTTGAACCTCTTCAAACGTTAACAGGCCGTGCAAATACATTGGATTTTAGTCAAAAGGGCTTGCTTGCTTCTGGTAATGGTTCATCTGTACAGGTTCTGAACGACCCTTCCGGTGCACAGAACTATTCCAAGTACATGACTCATTCCATGGCGAAAGGTTACCAGGTAGGAAAGCTAGTATTCCGGCCATACGAAGATGTTCTAGCCATCGGCCATTCCATGGGCTGGTCCAGCATTCTTATCCCAGGTGCCGGAGAACCCAACTTCGACTCGTGGGTGGCCAACCCATTTGAGACATCTAAACAGAGGAGAGAAAAGGAAGTCCGGGCTCTCCTCGATAAGCTTCCACCTGAGACCATCATGCTTGATCCGAGCAAGATTGGTACAGTGAAGTCGACAAGGAGAGAGAAGCCAACAAAGCAAGAGAGGGAGGCTGAGATGGAAGCTGCCGTTGAAGCCGCAAAGGGCACAAAACTGAAGAACAAAACAAAAGGAAGGAACAAGCCAGGCAAAAAGATGCAGAAAAGGCTAGATGCAATTGCTACAGTGAAGAGGCCTTACTTAGAGGAGAAAGTTAAGGAACAGGTAAACATGTCGCGGAAGAAGCAGAAAACTAGTGAGGAAGATGAACTTCCAAAAACTTTACAGCGGTTTGCTCGTAAGAAACCATCATCGTGA 1563 0.4479 MFEDISNELELRIQNYLRGGGADLEVLKDKKLKGQLTVRENLYGQSAKAAAKAEKWLMPSEGGYLEAEGIEKTWNIKQEAIAREVDISSARKQYDIVLPELGPYTLDFTSNGRYMAVGGRKGHLGIVDTMNVSLIKEFQVGETVRDVVFLGHKLDFAAAQKKYLYIYNREGTELHCLKEHGSVLRLQFLENHYLLVSINKFGQLHYQDVTTGEMVNNFRTGLGRTNVMQVNPFNGVVALGHSGGTVTMWKPTSSAPLIKMLCHHGPVSALAFHSNGHLMATAGQDKKVKLWDLRKFEPLQTLTGRANTLDFSQKGLLASGNGSSVQVLNDPSGAQNYSKYMTHSMAKGYQVGKLVFRPYEDVLAIGHSMGWSSILIPGAGEPNFDSWVANPFETSKQRREKEVRALLDKLPPETIMLDPSKIGTVKSTRREKPTKQEREAEMEAAVEAAKGTKLKNKTKGRNKPGKKMQKRLDAIATVKRPYLEEKVKEQVNMSRKKQKTSEEDELPKTLQRFARKKPSS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1742 520 ProSiteProfiles Trp-Asp (WD) repeats profile. 260 301 IPR001680 GO:0005515
Aev05g1742 520 SMART BING4CT_2 339 419 IPR012952 -
Aev05g1742 520 Pfam WD domain, G-beta repeat 261 292 IPR001680 GO:0005515
Aev05g1742 520 Gene3D - 90 374 IPR015943 GO:0005515
Aev05g1742 520 MobiDBLite consensus disorder prediction 454 520 - -
Aev05g1742 520 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 260 294 - -
Aev05g1742 520 Pfam BING4CT (NUC141) domain 340 418 IPR012952 -
Aev05g1742 520 PANTHER WD-REPEAT PROTEIN BING4 4 516 IPR040315 -
Aev05g1742 520 PANTHER BNAANNG36350D PROTEIN 4 516 - -
Aev05g1742 520 ProSitePatterns Trp-Asp (WD) repeats signature. 279 293 IPR019775 -
Aev05g1742 520 MobiDBLite consensus disorder prediction 467 512 - -
Aev05g1742 520 SMART WD40_4 253 292 IPR001680 GO:0005515
Aev05g1742 520 SMART WD40_4 295 329 IPR001680 GO:0005515
Aev05g1742 520 SMART WD40_4 89 128 IPR001680 GO:0005515
Aev05g1742 520 SMART WD40_4 211 250 IPR001680 GO:0005515
Aev05g1742 520 SUPERFAMILY WD40 repeat-like 100 368 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1742 Aev-Chr5 14822886 14826709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1742 102 327 U-box Gene Family AT2G33340 24.895 2.92e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1742 K14768 - gmx:100802940 867.84