Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1730 ATGTCTTTTTCTTCTCTTCCGGGTCCTCTGCCTAACGCTTTCGGTGTGATGGGTCGTGCTGGCGAGATAGATCTTGAATTGTCTGATATGGAATTTCATAGTTTGAGCCCCTTATTGCCCCATACCCAGGATTGCATGGTAAATAGGAGGAGCAATAAAGACGATGGCAATGCTGGGTCTGAGAACAGGATCGTGCCTTTGATTAATAGAGGAGAGGAATTTGATGCTAGGAGAAGTTCTTCTGTTGCAGGAAAACCACGCTACGCTAAGGTTTGCTCTAAAGGTCACTGGAAGCCAGCTGAAGATGACAAACTCAAAGAGCTTGTTGCTCAATTTGGTCCTCAAAATTGGAACAAGATTTCACAGCATATCGAAGGAAGATCAGGTAATCCAGAACCGATTTCCAGTAAAACGGAAAAACGGTTTTATTGCAAAAGCTGCAGATTGAGGTGGTTTAACCAGCTTGATCCTAGAATCAACAAAAGAGCTTTTACCGAGGAGGAAGAGAGGAGGCTCTTAGCTGCCCATAGATTTTACGGTAATAAATGGGCTTCAATTTCAACTCTCTTCCCTGGCAAAACAGACAATGCTGTCAAGAACCATTGGCATGTGATGATGGCTAGGAGGCAGAGAGAGCAGTTAAGTGGCTACACAAGGAGAAAGCCCACCCCATTCAATCAAAGAATTCCAAATGTTCCAGCTTTTACCATATCAAATAGTACAGTTGCCACCGTCTCAAGCAACATGGATGATTCTGCCATCACCTATTCTAACCTCTCCTTCACAACCACCTCAGCAAGACCAATTCCCATATCTTTCAACAACCCAATTCCAGTAGTTCAGAATCACCATGCACATGCCCATGAATCAATTATAGGTTTATCGGGAGAAAAGAGGTTTACAACCCTCGATTTCGGCTCTGACAAGTTTTCCGGTTCTTGGAACGGTTTATATAAGCTTGGGCCGAGGGGAAAGCTCGTGGGCGTGACTGACAAATCAACTTATTCAAATTGGAATCCGGAAGTTTCGGTAGCTCAGTCATTACTTGCCACCATGGTGACCAATCCCTCAATTCCCAGAGAAACTGAAGACGTATGTGCTAAAGCTAACATGCCATTCATTGACTTTCTAGGAGTAGGAGATTCATAG 1149 0.4395 MSFSSLPGPLPNAFGVMGRAGEIDLELSDMEFHSLSPLLPHTQDCMVNRRSNKDDGNAGSENRIVPLINRGEEFDARRSSSVAGKPRYAKVCSKGHWKPAEDDKLKELVAQFGPQNWNKISQHIEGRSGNPEPISSKTEKRFYCKSCRLRWFNQLDPRINKRAFTEEEERRLLAAHRFYGNKWASISTLFPGKTDNAVKNHWHVMMARRQREQLSGYTRRKPTPFNQRIPNVPAFTISNSTVATVSSNMDDSAITYSNLSFTTTSARPIPISFNNPIPVVQNHHAHAHESIIGLSGEKRFTTLDFGSDKFSGSWNGLYKLGPRGKLVGVTDKSTYSNWNPEVSVAQSLLATMVTNPSIPRETEDVCAKANMPFIDFLGVGDS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1730 382 Pfam Myb-like DNA-binding domain 94 130 IPR001005 -
Aev05g1730 382 Pfam Myb-like DNA-binding domain 161 204 IPR001005 -
Aev05g1730 382 PANTHER OS08G0435700 PROTEIN 50 381 - -
Aev05g1730 382 Gene3D - 162 221 - -
Aev05g1730 382 ProSiteProfiles Myb-like domain profile. 156 206 IPR001005 -
Aev05g1730 382 CDD SANT 97 153 IPR001005 -
Aev05g1730 382 PANTHER MYB PROTEIN-RELATED 50 381 - -
Aev05g1730 382 CDD SANT 163 206 IPR001005 -
Aev05g1730 382 SUPERFAMILY Homeodomain-like 94 202 IPR009057 -
Aev05g1730 382 SMART sant 93 157 IPR001005 -
Aev05g1730 382 SMART sant 160 208 IPR001005 -
Aev05g1730 382 ProSiteProfiles Myb-like domain profile. 94 155 IPR001005 -
Aev05g1730 382 Gene3D - 94 160 - -
Aev05g1730 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 210 IPR017930 -
Aev05g1730 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 130 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1730 Aev-Chr5 14675257 14676697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1730 90 247 MYB Transcription Factor Family AT5G17800 65.190 3.20e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g1730 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1730 K09422 - tcc:108661853 291.967