Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1728 ATGGAAGATCAGCGCCAGCAAGAGCCAAAAAGTGGAAGCAATGGGTCCGAGAGAAGCGAGGGTGTGCGGTCAAGATGGAGTCCGAAGGCAGAGCAAATCCTCATACTAGAGTCCATCTTCAACAGTGGCATGGTCAATCCACCAAAAGACGAAACCGTCAAAATAAGAAAACTCCTTGAGAAATTTGGCACAGTGGGTGATGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCAAGGTCCCGCCGCCGCCAACGGCAGATGCAGGCCAGCCTTGAGCAGCCTCAAGTTGGCGGTGCAAACCCATATGATCATCAGACTAGCAGCTCATCATCATCATCTGCTTCAGCCATGTCCTCTTTCGGTGGCTACTCTCCTTCTTATCTTCCTGGCTCCTCTTCGTCATGTGCTGTTCCTGCTGGTAGCTTCTTCTCTTCAGCCTCTGCTCAAATGGTTTTCCCTCAAATTGATCACAACTTTTCTGCTGTCTACCTTTCTTCTGATGCTCCAAATTTGAACTACAGCAGCTCTGGATTTGGGGGAAGTGGTGGTATTCCAGGATCCATCACGGTTTTTGTGAATGGGGTTGCAACAGAAGTTCCAAGGGGGCCAATTGACTTGAAAACAATGTTTGGTGAAGATCTAATGCTACTTCATTCCTCTGGAGTGTCAGTTCCCACCAATGAATTTGGTTTTTCGAGGCAGAGCTTGCAGCATGGTGAAAGCTACTTTCTGCTATCTCTAATGGCTGCTGTAATTGATGATTTTGATCCCTTTCACCTTTTATCATCGGATCAGCCTGGCCTTGTGTTGGTTAAACAAGTTCTAACCGGTGACAATTTTGCTTCATGGAAAAGATCCATGGAAATGGCACTCAACGACAAGAACAAACTTGGCTTCGTTGATGGTTTCATTCTTCCTCCGACCGATGCAGATCCCCCTGCAGTTCACGCTCAATGGAGACGCCTCAATGATATCGTGAGTTCTTGGATTCTCAACTCTGTATCCAAAGAAATTGCATCCAGCATCATCTTTGCTGGTTCTGCTGCTACTATATGGACCGATCTCAACTCCCGTTTCCAACAAAAGAATGGTCCAAGAATTTATCAATTGCGCAAAGATTTGGTGAATCTTTCGCAAGGTTCCATGACTGTAAGTCAGTATTTCACTAAGCTGAAATGTATTTGGGAGGAATTAAATCAATATCGCCCAGTACTGATATGTGTTTGTGGTGGAGCTCAACAATTCCTAGAGCATGTGGATAATGAATATGTTCTTGTTTTCCTCATGGGCTTAAATGACTCTTATGCTCAAATTAGGGGTCAAATCCTTCTGATGAAACCTCTTCCACCTATCTCTGAAGTTTTTTCTCTTATGGTTCAAGAAGAACGCCAAAGATCTGTTTCAAATGAATCTGTTACCACCAATTTCACACCAGCTTTTGCTGTCTGCAATTCCAAACCTCAAGCTGATAGGTCCAAATCTATCAAGAAAGATCGTCCAGCTTGTGCTCATTATGGAATGCTGGGACACACTAAGGACAAGTGTTACAAGCTTCATGGATACCCACCCAATTACAAAAAACAACAACAGTCCACTGTTCGTATCAATCACCTCAAAACTTGTACCACTCCTACATCAACCTCTACACAAAATGATGGTTCTTTACAACTCTCTGCGACTCAATATCAGCAACTAATGACCCTTCTTGCATCTCAAATGGCACAAGCTACACCACCCATTGCCAACAATGAATCAGGTGATGTTGAAGGAGTACAAAACCTCCAAGATGATAAGGAAGGTCGCCATATTATGTTCTTTATGGCAAAGAACCAGATTACTCTTCATTCAGAGCTTTTGGATGTCTTGCTTTTGCTTCAACTATTCCTTCAACTAGAGATAAATTCACACCAAGGGTCATTCATTCTGTCTTCATTGGCTATCCGTTGGGATATAAGGGCTATAGACTATATGACATCAAGAACAAGAAATTCTTCATTTCCAGAGATGTTGTTTTCCATGAAAACATCTTCCCTTTTCACAGCATTTCATCTCAAGGTGACTGTCTGGATCTATTATCTGATATTGTTCTTCCTCAACCACTTCCGGACACAACATATTGCAACTCCTCTCAATACTCTTGTTCCGATTCATCCTATCAATGATCCTGATCCAATGCCATATATAATTCCACCAAGAAGATCAACTCGTTCTCATCGCCCTCCGAATTTGTCCTCTGCCATTATCAATGCTGGTTTCACTCAATCAAAGGCAGACTATTCCCTATTCTATCAAGGTACTGGAGACTCTTATGTTGCTATACTTGTTTATGTTGATGATGTCATCATTGCAAGCAAGAGTTCGCGCAATTATGCTTTAACCCTTCTTGAAGACACTGGATTTGCAGATTCCAAACCATCCACTCTTCCTATGGATCCTAATATCAAGCTAAATGCTTCTGATGGAGATCTTCTTGCTGGATCGTTCATGGAAGCTTGGATTGGAGGCTAA 2511 0.4301 MEDQRQQEPKSGSNGSERSEGVRSRWSPKAEQILILESIFNSGMVNPPKDETVKIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMQASLEQPQVGGANPYDHQTSSSSSSSASAMSSFGGYSPSYLPGSSSSCAVPAGSFFSSASAQMVFPQIDHNFSAVYLSSDAPNLNYSSSGFGGSGGIPGSITVFVNGVATEVPRGPIDLKTMFGEDLMLLHSSGVSVPTNEFGFSRQSLQHGESYFLLSLMAAVIDDFDPFHLLSSDQPGLVLVKQVLTGDNFASWKRSMEMALNDKNKLGFVDGFILPPTDADPPAVHAQWRRLNDIVSSWILNSVSKEIASSIIFAGSAATIWTDLNSRFQQKNGPRIYQLRKDLVNLSQGSMTVSQYFTKLKCIWEELNQYRPVLICVCGGAQQFLEHVDNEYVLVFLMGLNDSYAQIRGQILLMKPLPPISEVFSLMVQEERQRSVSNESVTTNFTPAFAVCNSKPQADRSKSIKKDRPACAHYGMLGHTKDKCYKLHGYPPNYKKQQQSTVRINHLKTCTTPTSTSTQNDGSLQLSATQYQQLMTLLASQMAQATPPIANNESGDVEGVQNLQDDKEGRHIMFFMAKNQITLHSELLDVLLLLQLFLQLEINSHQGSFILSSLAIRWDIRAIDYMTSRTRNSSFPEMLFSMKTSSLFTAFHLKVTVWIYYLILFFLNHFRTQHIATPLNTLVPIHPINDPDPMPYIIPPRRSTRSHRPPNLSSAIINAGFTQSKADYSLFYQGTGDSYVAILVYVDDVIIASKSSRNYALTLLEDTGFADSKPSTLPMDPNIKLNASDGDLLAGSFMEAWIGG* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1728 836 SUPERFAMILY Homeodomain-like 14 90 IPR009057 -
Aev05g1728 836 MobiDBLite consensus disorder prediction 88 116 - -
Aev05g1728 836 Pfam gag-polypeptide of LTR copia-type 263 308 IPR029472 -
Aev05g1728 836 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Aev05g1728 836 MobiDBLite consensus disorder prediction 1 27 - -
Aev05g1728 836 MobiDBLite consensus disorder prediction 82 116 - -
Aev05g1728 836 Pfam Retrotransposon gag protein 323 433 IPR005162 -
Aev05g1728 836 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Aev05g1728 836 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 247 - -
Aev05g1728 836 Gene3D - 23 90 - -
Aev05g1728 836 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 247 IPR044558 GO:0003700|GO:0048830
Aev05g1728 836 SMART HOX_1 21 88 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1728 Aev-Chr5 14628045 14641714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1728 7 246 Wox Gene Family AT5G17810 48.659 2.96e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aev05g1728 Retrotrans_gag 9.8e-13 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1728 - - aip:107632230 407.912