Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1702 ATGGTAGAAGAGTCAATTTCCAGAAAATCTTGCAACTCCAACGACCCACCACTCCTCCTTCAATGCGCGGACTTGATACTGCCATGGCTAACCCCACCTGAGCTCGCCAACGTCTCCATGACATGCACATTCCTCGCCAAGGTCTCCACCTCCATAACCTCCTGCCGATCCTCCGACGCTTCTAGAAGCTTCGAGAACCATCCAATCCCATTTATCAACAGCATAGACCACCACCCCTACGCCCACTTCCTCTATACCCCTTCCCTTATTTTGCCCTCCGCCGCATCCGACCTCCTCCGTCAACCCTGGGGCTCCTCCTCCGCTCGTCTCGCTTACGCACTGAGTCGGGTCCCTGAGGAATCTGTGAGTCTGGTGGACGAGTTGGGCCAGGACGTATTGTCTGGGTGCAAGTGCGAGGCTTGTGGGGGTGGAGTTTTGGGTTCGGGCTGTCCTTGTTCGTGCCTAGATGGGTTCGAGGACGTTGCTACCGAGTGTGGTCCGGGTTGTCGGTGCGGGTCGGATTGTGGCAATCGGTCGACCCAGAAAGGGGTTGCGGTTCGGGTAAAAATTGTGAGGGATTCGAGGAAAGGGTGGTGTTTGCGTGCTGACCAGTGGATTCCTGAAGGGGAGTTCGTGTTTGAGTATGCAGGTGAATTGTTGACAACCAAGGAAGCACAAAGGAGACATCACTATTATGATGAACTTGCATCTCTAGGTCGTTGCTCTTCTGCACTTTTGGTTGTAAGAGAGCATCTCCCATCTGGAAAAGCATGCCTGAGATTGAACATTGATGCCACAAGAATTGGAAATGTTGCTCGGTTTGTTAATCATTCATGTGACGGTGGTAATTTAACCTCAAAGTTAGTTAGACGTTCAGGCGATGTGCTCGCTCGCGTTTGCTTTTTCGCTTCGAAAGATATCCAAGAAGATGAGGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAGGGAGTAATGGTTTGCCTTGCTTTTGCGAAAGCTCTTGTTGTTTTGGAACATTGCCCTCAGAAGACACTTGA 1038 0.5087 MVEESISRKSCNSNDPPLLLQCADLILPWLTPPELANVSMTCTFLAKVSTSITSCRSSDASRSFENHPIPFINSIDHHPYAHFLYTPSLILPSAASDLLRQPWGSSSARLAYALSRVPEESVSLVDELGQDVLSGCKCEACGGGVLGSGCPCSCLDGFEDVATECGPGCRCGSDCGNRSTQKGVAVRVKIVRDSRKGWCLRADQWIPEGEFVFEYAGELLTTKEAQRRHHYYDELASLGRCSSALLVVREHLPSGKACLRLNIDATRIGNVARFVNHSCDGGNLTSKLVRRSGDVLARVCFFASKDIQEDEELTFSYGEIRKGSNGLPCFCESSCCFGTLPSEDT* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1702 345 SMART set_7 186 324 IPR001214 GO:0005515
Aev05g1702 345 Pfam SET domain 197 318 IPR001214 GO:0005515
Aev05g1702 345 ProSiteProfiles SET domain profile. 186 318 IPR001214 GO:0005515
Aev05g1702 345 SUPERFAMILY SET domain 57 331 IPR046341 -
Aev05g1702 345 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 9 335 - -
Aev05g1702 345 Gene3D SET domain 39 325 IPR046341 -
Aev05g1702 345 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 9 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1702 Aev-Chr5 14337822 14345266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1702 164 340 C2H2 Transcription Factor Family AT2G23740 35.870 1.73e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev05g1702 SET 9.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1702 K11433 - gmx:100786871 459.914