Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1679 ATGAAACAAGAAGAAGATGAAGGGCAGTGTTCTTCGCAAGCGATCCACAACACCATTCAGAGCTTCCAAGAGCAGTTGCTTCTTCATCATCATCATCCACAAAACGCTGATATCTTTGGAGGCTTGATGTTTCCAGAAGCACCATGGTCCATGCCACCGGTTCACCCCTTAAACCAACCCGGTCCGGTTCACAACAACAACAACCATATTGACCCTTTTCTTGTCTCTCCGGTCCGAGCATCATCACCTTCTTCACCATACTCAAGCTTCTTCAACAGAAGGGTCCCTTCTCTGCAGTTTGCATACGAGGGACCTTCCTCTGAACATCTCAGGATCATATCTGGAGTTGGGCCCATGGTTCAACCCGGTTCGGCTCCTTTTGGGCTCAACCAAGCCGAGTTAGGGAAGATGAGTGCGCAAGAAATCATGGAGGCTAAGGCTCTTGCGGCATCAAAGAGTCACAGCGAGGCTGAAAGGAGACGCAGAGAGAGAATCAATAACCACCTCGCTAAGCTCCGCAGCTTGTTGCCCAACACAACCAAAACAGACAAGGCTTCTTTGCTGGCTGAAGTGATTCAGCATGTGAAGGAACTGAAGCGAGAAACTTCATTGATAGCAGAAACGAGTCCAGTGCCTACTGAGTCAGACGAGTTAACGGTGGACGGAGCTGACGAGGATGGAAAGTTCGTGATAAAAGCGTCGCTGTGCTGTGAAGACAGGTCAGATCTCTTACCTGATCTCATAAAGACCTTGAAGGCGTTGAGGTTGAGAACACTCAAGGCTGAGATCACGACGCTTGGTGGGCGCGTGAAGAACGTGCTCTTCATCACTGGGGAAGAAGACTCGAGTAGTAGCAGTGGAGAACAAAGGCTTCAGCAGGAGCAACAGTATTGTATTAGCTCAATACAAGAAGCACTCAAAGCAGTTATGGACAAGGCTGGTGGTGGGGACCATGAATCTGCTTCTGGTGGGAATGTTAAGAGGCAAAGGACCAATGTCAATATCCTTCAACAAAGGTCCTTATGA 1026 0.4883 MKQEEDEGQCSSQAIHNTIQSFQEQLLLHHHHPQNADIFGGLMFPEAPWSMPPVHPLNQPGPVHNNNNHIDPFLVSPVRASSPSSPYSSFFNRRVPSLQFAYEGPSSEHLRIISGVGPMVQPGSAPFGLNQAELGKMSAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRETSLIAETSPVPTESDELTVDGADEDGKFVIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSSSSSGEQRLQQEQQYCISSIQEALKAVMDKAGGGDHESASGGNVKRQRTNVNILQQRSL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1679 341 CDD bHLH_AtAIG1_like 144 221 - -
Aev05g1679 341 PANTHER TRANSCRIPTION FACTOR BHLH30 61 336 - -
Aev05g1679 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
Aev05g1679 341 SMART finulus 155 204 IPR011598 GO:0046983
Aev05g1679 341 PANTHER TRANSCRIPTION FACTOR BHLH30 61 336 IPR045847 GO:0003700|GO:0006355
Aev05g1679 341 Gene3D - 144 204 IPR036638 GO:0046983
Aev05g1679 341 Pfam Helix-loop-helix DNA-binding domain 152 198 IPR011598 GO:0046983
Aev05g1679 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 204 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1679 Aev-Chr5 13991451 13995263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1679 87 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 67.518 1.59e-104 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g1679 HLH 2.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1679 - - qsu:112015145 421.394