Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1672 ATGGCCACTGTTGCAACTATAGGAATTGGAGTTGGAGTTACCAAGCTCCAACCCCAAAAACCCAAGCACAAGTCTCTATTTCTTGGCCAGGGACTCAGAATCAGGCACACTTTTGAGCCACCACCGCAGGGCAATGCAAGACTCACCATCTCAAACCCAAAGTTCTTCCAGGTTCACGCATTATTGGGAGGTGAATGGGTTGATTCGATACACAACCTCTTCGTGGGTGTTGGAGTCGGCCTTCCTTGCACTGTGATGGAGTGTGGGGATATAATCTACAGGAGCACTCTTCCAAAGTCAAATGGCTTGACAATCACAACCCCTGGGGTGATTCTCGTTCTGGGTGCTCTCTCTTACCTTTGGGCTACACCTGGTGTCGCACCTGGGTTCTTTGACATGTTTGTCCTTGCTTTTGTTGAAAGGTTGTTCAGACCCACTTACAAAAAGGATGATTTTATTCTGGGGAAGAAGTTGGGGGAGGGATCCTTTGGAGTGGTCTATAGAGTGACACTGGCAAACAAGCTATCTTCAAAGGAAGGTGACTTAGTCGTGAAGAAGGCTACGGAGTATGGTGCTGTAGAAATTTGGATGAACGAGCGTGTACGAAGAGCCTGTGCAAACAGCTGTGCAGATTTCGTATATGGTTTTCTTGAGAGCTCTTCGAAGAAAGCTCAGGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCCACCCTAGCTGACTTGATACAGAGTAGAGATTTTCCATATAATGTTGAAACACTGATTCTGGGTGAGGTCCAGGACTTGCCCAAGGGAGTGGAAAGAGAAAATAGAATAATTCAAACAATCATGAGGCAACTCTTGTTTGCTTTGGATGGTCTTCACTCAACTGGTATTGTGCATAGGGATATTAAGCCACAGAACATCATTTTCTCAGAAGGGTCTCGAACATTTAAAATCATTGATCTTGGAGCTGCTGCAGACCTGCGAGTTGGAATCAACTATGTTCCTAAGGAGTTTCTTTTGGACCCAAGATATGCTGCACCAGAGCAGTACATCATGAGCACACAAACTCCATCTGCACCCTCAGCTCCCGTTGCAACTGCACTTTCCCCAGTCTTATGGCAGTTGAATTTGCCTGACAGATTTGATATCTACAGTGCTGGTCTAATCTTTCTTCAAATGGCATTCCCAGGTATACGCACCGATAACTGCCTCATACAATTCAACCGTCAGTTAAAGAGGTGTGATTATGACATGGTTGCATGGAGAAGAAGTGTAGAGAGTCGATGTGGCCCTGAAATAAGGAGGGGCTTTGAGCTGTTAGATTTAGATGGCGGAATCGGATGGGAACTTGTGACGTCAATGGTCAGGTACAAAGCAAGGCAAAGGCTGAGTGCAAAAGCAGCATTAGCTCATCCTTACTTTGACAGAGAAGGCTTGTTGGCATTGTCTTTCATGCAAAATCTGAGGCTGCAGCTCTTACGAGCAACTCAGCAGGATTACGGGGAAGCCGCCAAGTGGATTACTCAGCTGATGGCAAAGTCTGGAACACAGAAGGATGGTGGATTTACTGAAGCTCAGCTTCTGGAAATGAGAGAAATTGAACCCAAGAAGAAGGCTAATGCACAGAGAAATGCTCTAGCTTCAGCTCTTAAGCTTCAGAGGAAAATTATTAGAACCCTAAATGAGAGCATGGATGAGCTCAACAGACGCAGGAAAAGCCTTTGGTGGAGCAGATGGATCCCAAGAGAGGAATGA 1743 0.459 MATVATIGIGVGVTKLQPQKPKHKSLFLGQGLRIRHTFEPPPQGNARLTISNPKFFQVHALLGGEWVDSIHNLFVGVGVGLPCTVMECGDIIYRSTLPKSNGLTITTPGVILVLGALSYLWATPGVAPGFFDMFVLAFVERLFRPTYKKDDFILGKKLGEGSFGVVYRVTLANKLSSKEGDLVVKKATEYGAVEIWMNERVRRACANSCADFVYGFLESSSKKAQEYWLIWRFEGDATLADLIQSRDFPYNVETLILGEVQDLPKGVERENRIIQTIMRQLLFALDGLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAAADLRVGINYVPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGIRTDNCLIQFNRQLKRCDYDMVAWRRSVESRCGPEIRRGFELLDLDGGIGWELVTSMVRYKARQRLSAKAALAHPYFDREGLLALSFMQNLRLQLLRATQQDYGEAAKWITQLMAKSGTQKDGGFTEAQLLEMREIEPKKKANAQRNALASALKLQRKIIRTLNESMDELNRRRKSLWWSRWIPREE* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1672 580 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 16 580 IPR044803 GO:0004674|GO:0009579
Aev05g1672 580 Coils Coil 546 566 - -
Aev05g1672 580 Gene3D Phosphorylase Kinase; domain 1 138 232 - -
Aev05g1672 580 Gene3D Transferase(Phosphotransferase) domain 1 261 474 - -
Aev05g1672 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Aev05g1672 580 ProSiteProfiles Protein kinase domain profile. 152 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1672 580 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 16 580 - -
Aev05g1672 580 ProSitePatterns Protein kinases ATP-binding region signature. 158 186 IPR017441 GO:0005524
Aev05g1672 580 CDD STKc_SNT7_plant 156 470 - -
Aev05g1672 580 Pfam Protein kinase domain 154 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1672 580 SMART serkin_6 152 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g1672 580 SUPERFAMILY Protein kinase-like (PK-like) 137 472 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1672 Aev-Chr5 13938346 13943982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1672 270 471 Core Cell Cycle Gene Families AT2G38620 29.091 5.81e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Aev05g1672 Pkinase 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1672 - - gmx:100778588 988.023