Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1669 ATGGATCTAATGGATGGAGCAAGCTCCATAGAGGAAAGCACCACGTGCACAAATGACTCGGTTTCCATAACCCTAACCCCGGCCTCACAATTTACCGCCACGTCTAAGAAGCTGTCGCCGCGGCCACAAAACAGCTTATGCCGTGTTGGCAGCGGCGCCAGCACGATTGTGGATCCGGACATCATAGTTTGTGGCCCCACCACCGAAGCTGAGTCGCGAAAACTCCCTTCCTCCAAGTATAAAGGTGTGGTGCCCCAGCCAAATGGTCGTTGGGGCGCTCAGATTTATGAGAAGCACCAACGAGTTTGGCTGGGGACCTTCAATGAGGAGGACGAGGCCGCAAGAGCCTACGACATCGCAGCTCAGAGGTTCCGCGGCAAGGACGCCGTCACCAACTTCAAGCCCCTTGCCGTCGCCGAGGACGGCGGCGATGACGACGATTTTGAGGCGGATTTCCTCAACTCCCATTCCAAATCCGAAATTGTGGACATGCTGAGGAAGCACACTTACAATGACGAGCTGGAGCAGAGCAAGCGGAGCCGCGGCCTGGTCGGACGGCGGCTCAGCCGTGGTGGAGGAGGGAACGGCGCGGGGGCGATGTTGTTAGGCGCGTGCGGAGGGAAGGCGCGTGAGCAGTTATTTGAGAAGGCAGTTACGCCTAGCGACGTTGGGAAGTTGAATCGGTTAGTTATACCGAAACAGCACGCGGAGAAGCACTTTCCGTTACAGAACAGTTGTGGCGGAGGCGGCGGAATCGCGGCGGCGGCGGCGAAAGGTGTTCTGCTGAATTTTGAGGACGTTGGAGGGAAGGTGTGGCGGTTCCGATACTCATATTGGAACAGTAGCCAGAGCTACGTGCTCACAAAAGGATGGAGCCGGTTCGTGAAGGAAAAGAGCCTGAAAGCCGGTGACACGGTTTGTTTCCACAGGTCGACCGGACCGGACCGGCAGCTTTATATTGATTGGAAGGTGAGGAGTGTTGTTAGCAGTGAGATTGGGATGTTCGGACCGGTTGGATCGGTTGTGGAGCCGGTTCAGATGGTTCGGCTCTTTGGGGTGAACATTGTGAAACTACCTGGGTCTGATACTAATAACAATAATATTAATAACGGTAGTGCTTCCGTTGGTGGGTGCTGCAATGGGAAGAGGAGAGAGATGGAATTGTTTACGTTAGAGTTTAGCAAGAAGCCTAAGATCATTGGAGCTTTATAA 1212 0.5446 MDLMDGASSIEESTTCTNDSVSITLTPASQFTATSKKLSPRPQNSLCRVGSGASTIVDPDIIVCGPTTEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGKDAVTNFKPLAVAEDGGDDDDFEADFLNSHSKSEIVDMLRKHTYNDELEQSKRSRGLVGRRLSRGGGGNGAGAMLLGACGGKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQNSCGGGGGIAAAAAKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLKAGDTVCFHRSTGPDRQLYIDWKVRSVVSSEIGMFGPVGSVVEPVQMVRLFGVNIVKLPGSDTNNNNINNGSASVGGCCNGKRREMELFTLEFSKKPKIIGAL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1669 403 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 4 403 IPR044800 GO:0003700
Aev05g1669 403 SMART B3_2 214 326 IPR003340 GO:0003677
Aev05g1669 403 Gene3D - 204 332 IPR015300 -
Aev05g1669 403 Pfam AP2 domain 78 126 IPR001471 GO:0003700|GO:0006355
Aev05g1669 403 SUPERFAMILY DNA-binding pseudobarrel domain 212 314 IPR015300 -
Aev05g1669 403 SUPERFAMILY DNA-binding domain 78 134 IPR016177 GO:0003677
Aev05g1669 403 SMART rav1_2 79 140 IPR001471 GO:0003700|GO:0006355
Aev05g1669 403 Pfam B3 DNA binding domain 214 322 IPR003340 GO:0003677
Aev05g1669 403 CDD AP2 78 133 IPR001471 GO:0003700|GO:0006355
Aev05g1669 403 ProSiteProfiles AP2/ERF domain profile. 79 134 IPR001471 GO:0003700|GO:0006355
Aev05g1669 403 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 4 403 - -
Aev05g1669 403 Gene3D AP2/ERF domain 78 135 IPR036955 GO:0003700|GO:0006355
Aev05g1669 403 CDD B3_DNA 213 311 IPR003340 GO:0003677
Aev05g1669 403 ProSiteProfiles B3 DNA-binding domain profile. 214 326 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1669 Aev-Chr5 13895163 13896374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1669 7 402 RAV Transcription Factor Family AT1G13260 57.711 3.02e-139 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-RAV Aev05g1669 B3 1.5e-27 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1669 K09287 - gmx:100801107 566.229