Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1664 ATGCAAACTCATCATCATCACTTCTTCTCCTACATATCCTCTTGTGGGAGTAGCAGTAGTGTCTTCTTGGACGATGCTGATGATGAAGCCTCCATCTCCCTCTCTCTCGGCCTTCCAGGCCAACACAGCAACAACCCAAAAGTACTCTCAACTTCCTCATCAAACCTTTCCCCTTCACTTCACCAAAGCCCTAACTCTGATGACCAGAGTGGTGTAACAGTTGCCCTCCACATTGGCCTACCCTCATCCACCAATGCACAGGATCATCACAGCACCACAAGCAATAATAAGTCTGATCATCATTTGGTTTCAGAGCCTCCCGTTCAGGGTCAGTACTGGATTCCTTCTCCTGCCCAAATCCTCATAGGACCCACTCAGTTCTCTTGCACTGTCTGCAACAAGATGTTCAACCGCTTCAACAACATGCAGATGCATATGTGGGGACATGGATCACAATATAGGAAGGGGCCTGAATCGTTAAGAGGGGCAAAACCAGCTTCTTCAATGCTGAGGCTTCCCTGCTATTGCTGTGCAGAGGGATGCAAGAACAACATAGAGCACCCAAGGTCGAGGCCACTGAAGGACTTCAGGACCCTCCAAACGCACTACAAGAGGAAGCACGGAGCCAAGCCATTCGGGTGCAGGAAGTGCGGGAAGCCGTTCGCTGTCCGAGGCGATTGGCGGACTCACGAGAAGAATTGTGGGAAGCTCTGGTTCTGCATCTGCGGCTCTGATTTCAAGCACAAGAGGTCCCTCAAGGACCACGTCCGGGCCTTCGGTGATGGCCACGCTCCCCACACCGTCGAGAGCTGTGATGATCAGTTCGTCGATAATGAAGGTGAGGATGACGATGATGAAGAGTTAGATGATGATGAAGATGAAGATGACAATAATAACACCAGTTAA 906 0.5033 MQTHHHHFFSYISSCGSSSSVFLDDADDEASISLSLGLPGQHSNNPKVLSTSSSNLSPSLHQSPNSDDQSGVTVALHIGLPSSTNAQDHHSTTSNNKSDHHLVSEPPVQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDDQFVDNEGEDDDDEELDDDEDEDDNNNTS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1664 301 PANTHER ZINC FINGER PROTEIN WIP6 6 298 - -
Aev05g1664 301 ProSitePatterns Zinc finger C2H2 type domain signature. 129 149 IPR013087 -
Aev05g1664 301 MobiDBLite consensus disorder prediction 37 104 - -
Aev05g1664 301 SUPERFAMILY beta-beta-alpha zinc fingers 195 232 IPR036236 -
Aev05g1664 301 PANTHER ZINC FINGER PROTEIN WIP2 6 298 IPR043584 GO:0003700|GO:0010468
Aev05g1664 301 MobiDBLite consensus disorder prediction 274 301 - -
Aev05g1664 301 MobiDBLite consensus disorder prediction 267 301 - -
Aev05g1664 301 Gene3D Classic Zinc Finger 151 236 - -
Aev05g1664 301 SUPERFAMILY beta-beta-alpha zinc fingers 123 148 IPR036236 -
Aev05g1664 301 MobiDBLite consensus disorder prediction 37 102 - -
Aev05g1664 301 ProSiteProfiles Zinc finger C2H2 type domain profile. 127 154 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1664 Aev-Chr5 13817939 13819904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1664 26 290 C2H2 Transcription Factor Family AT1G13290 67.286 7.35e-116 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev05g1664 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1664 - - aprc:113870355 433.721