Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1579 ATGGCCGTGGATTCAACTATTTCATCTCCGTTGGGCCCCCCTGCGTGCGAAAAAGACGCAAAGGCACTGCGATTCATCGAGGAAATGACCCGAAACGCCGACGCCGTCCAGGAGAAAGTGCTGGCGGAGATTCTGAGCCGCAACGCCGAGACAGAGTACCTCAAACGATTCAAACTGGGTGGCGCCACCGACCGTGAAACCTTCAAGTCGAAGGTTCCCGTGATCACGTACGAGGATGTCCAGCCCGAGATTCAGCGAATCGCAAATGGCGACCGCTCCGCAATCTTGTCAGCTTATCCCATCTCTGAATTCCTCACCAGTTCTGGGACATCAGCTGGTGAGAGAAAGCTCATGCCCACAATTAAGGAAGAGCTGGATCGTCGCCAACTTCTATACAGCCTCCTCATGCCAGTTATGAACCTTTATGTGCCGGATTTGGACAAAGGGAAGGGCCTATACTTTTTATTTGTGAAGTCTGAAACAAGAACACCGAGTGGGTTATTGGCCCGTCCGGTTCTGACCAGTTACTACAAGAGTGACCATTTCAAAACCCGACCCTATGACCCGTACAATGTTTACACCAGCCCAAACGAAGCCATCTTGTGCCCAGACTCATTCCAGAGCATGTACACCCAAATGTTATGCGGCCTCATTGAGCGCAACCAAGTCCTCCGCCTTGGTGCCGTCTTTGCCTCCAGCCTCCTCCGTGCAATTCGGTTCCTCCAACTCAATTGGCCCGAATTGGCCCACGACATCCGAACCGGGAGTCTGAATTCTCGGATCACTGACCCAGCAATAAGGGATTGCATGAATCAGGTCATAAAGCCTGACCCAGAATTGGCCTCATTTGTGGACCAAGAATGCTCGAAAGAAAATTGGGAAGGAATCATCACAAGGATTTGGCCCAACACCAAATACCTAGACGTCATAGTAACTGGTGCTATGGCCCAATACATCCCAACACTCAACTACTACAGTGGTGGGTTGCCACTTGCATGCACCATGTATGCTTCCTCAGAGTGCTACTTTGGACTGAACCTCAACCCAATGTGCAAGCCCTCCGAGGTTTCTTATACCATCATGCCAAACATGGCTTATTTCGAATTCCTTCCCCACGAATCTGGGGACCACAGCTTGGCCAGTTCTCATGACTCAACCAGACTCGTGGATCTCGCGGACGTGGAAGTGGGTAAAGAATATGAGCTGGTGATCACAACCTACGCGGGGCTAAACCGCTACCGAGTCGGCGACATCCTCCGAGTCACCGGGTTCCACAACTCCGCGCCGCAATTTCACTTCGTGCGCCGGAAGAACGTGTTATTAAGCATTGACTCAGACAAAACGGATGAGTCTGAGTTGCAGCGAGCCGTGGAGAACGCTTCGAAGCTATTGACCGAGTTCAACACAAGTGTAGTGGAATATACAAGCTTTGCAGATACGAGGACGATACCGGGTCACTACGTGATATATTGGGAGCTCTTGACCAAAGACTCGGACAACTCACCGAGTCATGATGTGCTGAATCGGTGCTGTTTGGAGATGGAGGAATCGTTGAACTCGGTTTATAGGCAGTGTCGAGTCGCTGACCATTCAATTGGGCCTTTGGAGATAAGGGTTGTAAAAAGTGGTACGTTTGAGGAGCTTATGGATTACGCAATATCAAGGGGTGCGTCCATTAACCAATATAAGGTGCCACGATGTGTGAATTTTACACCCATAATGGAGCTATTGGACTCTAGGGTGGTGTCTGTCCACTTTAGCCAAGATTTGCCACGTTGGTCCCCTCAAAGGAGAAGGTGA 1800 0.505 MAVDSTISSPLGPPACEKDAKALRFIEEMTRNADAVQEKVLAEILSRNAETEYLKRFKLGGATDRETFKSKVPVITYEDVQPEIQRIANGDRSAILSAYPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPDLDKGKGLYFLFVKSETRTPSGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLIERNQVLRLGAVFASSLLRAIRFLQLNWPELAHDIRTGSLNSRITDPAIRDCMNQVIKPDPELASFVDQECSKENWEGIITRIWPNTKYLDVIVTGAMAQYIPTLNYYSGGLPLACTMYASSECYFGLNLNPMCKPSEVSYTIMPNMAYFEFLPHESGDHSLASSHDSTRLVDLADVEVGKEYELVITTYAGLNRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDESELQRAVENASKLLTEFNTSVVEYTSFADTRTIPGHYVIYWELLTKDSDNSPSHDVLNRCCLEMEESLNSVYRQCRVADHSIGPLEIRVVKSGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSVHFSQDLPRWSPQRRR* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1579 599 Pfam GH3 auxin-responsive promoter 26 570 IPR004993 -
Aev05g1579 599 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 5 599 IPR004993 -
Aev05g1579 599 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.2-RELATED 5 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1579 Aev-Chr5 12296198 12300287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1579 17 587 EF-hand Containing Proteins AT1G23160 51.123 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1579 K14487 - gmx:100776488 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1579 05 12296198 12300287 Aev03g0588 03 4299930 4309376 PCT
Aev01g1921 01 24159766 24161719 Aev05g1579 05 12296198 12300287 PCT