Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1556 ATGGACTACTATGGGATCAAAACTGAAGCAGAGATCCTTAGCGGGAACATTATGAAGATGTCAAAATCTTTCACCAAAAAGAGGGATTCGGACGCAATTAAAGAGGGCCGTGAGTCCCTAATGAACGAGGCGCGTACTTGGTTCAAAGATGGTGGCAGTGGTGGACCAGATTCTCGGAATGAGGAATGCGCGAAAGCTTCGGCATGGTATCATGTTACCTATCATCCTAGTTACTGGGGTTGTTACAATGAAGGATTTAATAGGGACCATTTTCTGAGTCTCCCTTGGGAGAGGGTGAGGTGCACTGATGAGAGGCGCGTGGAAACTCCAAAGCTATGGATGCGGTTCCGGGATGACCAGGAAGTTAGGGAATATTACCAGGAGTATGCCAATAAGGTAGACTTTACATTTAAGATTAGGAGTACAAAGAAGACGAAAGACCAAAGAGTACGGTATCGTATATTTGCATGCTCGAGGGAGGGATACAGGAGGTCGAAGGTAGATACAATTGCTAAGTCAAACCCAACAATTGTTGCAAATTGCGGGGAAAGGATTACAGTTACAATGGACGAGACCGGAGATCTTGTAATAACCAAGGTTGTGACTGAGCATTCACACTTAGTAAGCCCCAGACGGGCTAGGTCACTAAAAAAGAACAGAATAATCAATATGCAAGCCAAACGAGTTATTGACATAAACGACAATGCGGGTGTGAGGACGAATCAGATATACCATAGCATTGTGGAAGGTGCTGGCGGGTATGATAAGGTTGGTTTCAGTGAGAAGGATCTGCGAAACTATGTGACCAGAAACGCTAATAAGGAACGGGAGGCTGATGACGCCGACTTCCATACTATTGTGCCCTGTGCCACTAGTTCGCCAATTGAAAAACAATTTCAACAGGAGTACACTCGGGCTAAGTTTGTGGAGGTTCAGAAGGAATTCCGGTTGAAAGCCAATTGTTCAACGAGGGAGACAGGTAAGGTTGGGATGATTATTTTGTATGAGGTTGAGGAAGAAGTGGAGCAGAGCTGCCTAAGCGCAGGTCATGTGTTTAGTGTCATGTTTGATAGCTCCTCGCTAGAAGTGAGTTGTGATTGCATGATGTTTGAATTTCGGGGCATTGTTTGTCGGCACTCATTGTGTGTCCTCCAGGCGAATAGGGTTAAAAAGGTGAATGAGAAATACATATTGTCTAGGTGGAGCAAGAATGTTCGCCGAATACATTCAAGGATAAAGTGCAGTCACGACCCTTCACGGGTTCAGCCGGATGCTGAGCGGTATGACAAGATGTGCAAAAAGTTTTACAACCTTGCAGAGGTTGCATGTTACAGTGACAAGCTTGCAAATACAGTAAACTGTATTTTGGACGATGCTTGGCAGCTGGTCGGAGAGCAAAGCGAGGGAACAAGTGCTGCCTGCGAGGTGGTGGCGGGGGAAGATTCTGGGATTAACACAACAGACGAGGCGAATGTTATTCTTAGTCCCCCACATGTGTCACGGAAGAGCCGCAAGCGCACAAAGACTTTTAAGCCAGGACAGTTCAAGAGTGGCGAAAAGCACAAAAAGAGCAAACAAGACAATCGAACAAGTATCACAGAGAGTGTCGGTGTTTCGGAGGCCTTTGAAAATGGTGGGCATAATTTTTATGTCCCCGCGCCCCACAATGTTCTTGAAGATGGGACATGTGCATTAGATGGATGGCCAGACGTGGGCTCCATGTGA 1725 0.4614 MDYYGIKTEAEILSGNIMKMSKSFTKKRDSDAIKEGRESLMNEARTWFKDGGSGGPDSRNEECAKASAWYHVTYHPSYWGCYNEGFNRDHFLSLPWERVRCTDERRVETPKLWMRFRDDQEVREYYQEYANKVDFTFKIRSTKKTKDQRVRYRIFACSREGYRRSKVDTIAKSNPTIVANCGERITVTMDETGDLVITKVVTEHSHLVSPRRARSLKKNRIINMQAKRVIDINDNAGVRTNQIYHSIVEGAGGYDKVGFSEKDLRNYVTRNANKEREADDADFHTIVPCATSSPIEKQFQQEYTRAKFVEVQKEFRLKANCSTRETGKVGMIILYEVEEEVEQSCLSAGHVFSVMFDSSSLEVSCDCMMFEFRGIVCRHSLCVLQANRVKKVNEKYILSRWSKNVRRIHSRIKCSHDPSRVQPDAERYDKMCKKFYNLAEVACYSDKLANTVNCILDDAWQLVGEQSEGTSAACEVVAGEDSGINTTDEANVILSPPHVSRKSRKRTKTFKPGQFKSGEKHKKSKQDNRTSITESVGVSEAFENGGHNFYVPAPHNVLEDGTCALDGWPDVGSM* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1556 574 MobiDBLite consensus disorder prediction 512 529 - -
Aev05g1556 574 ProSiteProfiles Zinc finger SWIM-type profile. 352 388 IPR007527 GO:0008270
Aev05g1556 574 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 266 455 IPR031052 GO:0006355
Aev05g1556 574 Pfam FAR1 DNA-binding domain 124 208 IPR004330 -
Aev05g1556 574 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 106 236 IPR031052 GO:0006355
Aev05g1556 574 MobiDBLite consensus disorder prediction 496 532 - -
Aev05g1556 574 PANTHER OS03G0843700 PROTEIN 266 455 - -
Aev05g1556 574 SMART 26again6 363 390 IPR006564 GO:0008270
Aev05g1556 574 PANTHER OS03G0843700 PROTEIN 106 236 - -
Aev05g1556 574 Pfam SWIM zinc finger 361 386 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1556 Aev-Chr5 11853433 11857463 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev05g1556 FAR1 6.2e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1556 - - vra:106763416 244.973