Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1536 ATGGATCCTTTTGATGATATTCTACCAGTAGCACCTGCTGCCCGTGGTCGACCTAGTGGCAAGTTTGCTCCAAAGGCCAAAGCTAAGCAGCCGCCTCGAAAGGAAAAATCTGGTTCAGAACATGATGAAGGTGTTTCTGCTTTGAGTATGCCCGCTGAACAGTTTATGGGGTCCGGAAATAGTACACAAGTAGAACTTCCTAATTTGGAGGAACACGTATGTGTGAAAGGTGACTCTGCAGCCTTAGTGGATGCTATACCTTCTACACCTGCATCATCTGAAGTTGAGCCTGTTTTGAATTTTACAGATCTTCCAAAACCAGCATTTGAGGCAGATCCTGTAGCATCTGAGGTGGGTCCAGTTACTAACCCCATTCCTGAGACCAGTCTCACAGGTAGTATGGAAGAGCCGCCTAAAAACGGGAACGGATCATCGCTTGAGAGCAACAAGCATCTGGAACTTATTGATAATTCATCGCAAGTTGGCCTGGACATGGGATTCAGAAGTGCTTCACATAATAGTGTTGCAATATTTGAGAGCAACATTCAATCAAGTTTTGACGAGCGAAGAGAAAGAGAGGTAGTGTCTGAGAAATTTGAATTGGATCCTTTTAGTGATATCCTCCCTGGTTCTGGCACAAAGACTGCTCGTAAGTTTCAACCCAAGATTAAGCCACGACCTAGAGTAGGCACTACAAAAGCTCTTACTTCTTCTTCATCTAATGTTATGTTGGGAATGTCCGATGAGCTACCCACATCCTGCACAAATGAAGTTCAATCCTTCAAGTCTAGTGGTAATGGTAGTGGCGAACTAAATCGATCTACCGATTCACCTGTATCTTCATCGGATATCCCTACTACTGATTTATCAAATAAGTTTGAAAATATAAGCTCAAGTATTCCATTCTCTGAAGACAGCAGTAGCTTGGCAGCAGTCATTCCTTCTCAACTGGATTCCTTCGATGTTATGCTTTCAGAGGTTTCAGTTCATAATGGAACTAGGCATTTACCATCTAGTATTGGTAAATCATCTGGAGAGAATGCAGACATTTTTTCTGGGTTGGATTCCCTTGATGACTTGCTCCCCCAAGCCGGCACAGATACAGGAAAACCAGCTCTTCAATCCTTCAACGAGAAAGGCACAGAGGGAAATTTTGTCATTCCAGCAAGTAATTCTATGAACTCTTCTGGGGTATGTGATACTACCCAAGTTCAAATGTTTCCCGGGTCTCATACCACCCAAGATTCATTAACCGTCGATGAAGCTGCAGTCCTGAATGAGGATGATACTCATGCAAACAATAGAAGGTTGGAAACAGAGGAAGTTTTGGACTTGGATCCTGGCTGTCCAATCAATGATGTCTTACATTATCAGTCCCTGCAATCTGGTACAGATCCAATAAATGAAGAATTGACCAATACTGCAGATAATCCCACATTGGCGGAGCTTTTGCAGGCTGATGTTACTGGAGAAAAACAAGATGGTAATGGGAAAAAAAAGGATGGCTCAAAGTTGAGTTCTCCTAGGAAGCATAGACGATCTTCTGGTGCTCATGAGGAGGACAAAGGTGTTAAAACCTCAAGGCAACTGAGAAAACAAGCACCTCTGAAACATGTTAACAACTCATTGGATGACGATGATGGTGATGATCTTGATCCTCCCTATAATCCTGAAAGAGATGAACTTGAAGAAAATGATGATGAATTTGAAGTGGACTATTCATCTAAGAAGACAGGATCGAGTTCGATAAAGAAACCTGTGGCTAAAAATGGAAAAACATCTCGAAAGCGTAAGAAGGATAGTGAGGGTGTAGGAGACACCCCTAAAGAACCTCGTAAAAAGTTCTCTCATTCGACCCAACGAAGAAAAAGATACATGAACAAGACCCTGCTGGAAATTCCTGAGGATGAAATTGATATGCAAACATTGCCTCTTAAGGATATTATTTTACTTGCAGAATACAAAGAGCGGCTGGCAAAAAAGGATGCAACAACATCATCAACCAATCAAAGCGGTGTAGATCCCTTTCATGAAGATGATGCTTATGGTGAAGAGGAGAACTTTGGTTCAGATGGTAGAGAACCAGGTGATGATCAACCGAGCGAAAGTGTTCCATTGGCCTCCTCTTTGTTCAATTACCAGTCTTTCATGGATAAGGCACCTAGGGGAAAATGGACTAAACAAGATACTGAACTGTTTTATGAGGCTGTTAGGCAGTTTGGCACAGACTTTTCTATGATACAACAACTTTTTCCTGATCGAACGCGACATCAAATAAAGTTGAAGTACAAGAAGGAAGAGCGACAACATCCTTTACAATTAGCTGATGCTATAAATAATCGTGCAAAAGATCACACTCATTTTAAGTTGGTGATTGAGCGCCTGCAACAAGCTTCCGCGAAGGCAGATCAAGATCTTGGTAGAGAAGAAGCCTCAGATTTCATGACAGGGGAAGAGGTTGAGGACTTGGCACCTAGTACTACTAATGAGGATGTTGCAGCGACTGAGCAGGAGACCGTTGTAACGACTGAGCCGGAGGCAAACATCAAAGATCAGGAAGAATCTATGGCAATTCAAAGTCCAGAGCAATCTGATGATAGTGATGATCTTCAAAATTGGGCTCAATATAAAAGTGAATATTAG 2643 0.4226 MDPFDDILPVAPAARGRPSGKFAPKAKAKQPPRKEKSGSEHDEGVSALSMPAEQFMGSGNSTQVELPNLEEHVCVKGDSAALVDAIPSTPASSEVEPVLNFTDLPKPAFEADPVASEVGPVTNPIPETSLTGSMEEPPKNGNGSSLESNKHLELIDNSSQVGLDMGFRSASHNSVAIFESNIQSSFDERREREVVSEKFELDPFSDILPGSGTKTARKFQPKIKPRPRVGTTKALTSSSSNVMLGMSDELPTSCTNEVQSFKSSGNGSGELNRSTDSPVSSSDIPTTDLSNKFENISSSIPFSEDSSSLAAVIPSQLDSFDVMLSEVSVHNGTRHLPSSIGKSSGENADIFSGLDSLDDLLPQAGTDTGKPALQSFNEKGTEGNFVIPASNSMNSSGVCDTTQVQMFPGSHTTQDSLTVDEAAVLNEDDTHANNRRLETEEVLDLDPGCPINDVLHYQSLQSGTDPINEELTNTADNPTLAELLQADVTGEKQDGNGKKKDGSKLSSPRKHRRSSGAHEEDKGVKTSRQLRKQAPLKHVNNSLDDDDGDDLDPPYNPERDELEENDDEFEVDYSSKKTGSSSIKKPVAKNGKTSRKRKKDSEGVGDTPKEPRKKFSHSTQRRKRYMNKTLLEIPEDEIDMQTLPLKDIILLAEYKERLAKKDATTSSTNQSGVDPFHEDDAYGEEENFGSDGREPGDDQPSESVPLASSLFNYQSFMDKAPRGKWTKQDTELFYEAVRQFGTDFSMIQQLFPDRTRHQIKLKYKKEERQHPLQLADAINNRAKDHTHFKLVIERLQQASAKADQDLGREEASDFMTGEEVEDLAPSTTNEDVAATEQETVVTTEPEANIKDQEESMAIQSPEQSDDSDDLQNWAQYKSEY* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1536 880 MobiDBLite consensus disorder prediction 488 638 - -
Aev05g1536 880 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 215 869 - -
Aev05g1536 880 CDD SANT 724 765 IPR001005 -
Aev05g1536 880 MobiDBLite consensus disorder prediction 853 880 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 801 880 - -
Aev05g1536 880 ProSiteProfiles SANT domain profile. 724 768 IPR017884 -
Aev05g1536 880 MobiDBLite consensus disorder prediction 256 290 - -
Aev05g1536 880 Pfam Myb DNA-binding like 715 798 IPR039467 -
Aev05g1536 880 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 215 869 - -
Aev05g1536 880 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 717 773 IPR017930 -
Aev05g1536 880 MobiDBLite consensus disorder prediction 828 846 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 682 698 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 595 614 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 122 151 - -
Aev05g1536 880 SMART sant 721 769 IPR001005 -
Aev05g1536 880 MobiDBLite consensus disorder prediction 114 151 - -
Aev05g1536 880 Coils Coil 792 812 - -
Aev05g1536 880 Gene3D - 725 788 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 206 244 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 28 42 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 545 569 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 512 528 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 1 63 - -
Aev05g1536 880 MobiDBLite consensus disorder prediction 660 705 - -
Aev05g1536 880 ProSiteProfiles Myb-like domain profile. 717 767 IPR001005 -
Aev05g1536 880 SUPERFAMILY Homeodomain-like 723 771 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1536 Aev-Chr5 11666897 11671534 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g1536 Myb_DNA-bind_7 2.4e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1536 K15198 - gmx:100792788 885.56