Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1524 ATGTTGTGTAGGTCAGTAGGTGTGTGCAGCGTCTATAAAAGAGAATCAGAAAAATATCCACACTCTCCCAAGTTCTTCTCTCTCTCCTTCTCTTTCTCTCTCTTCTTGAATTGTGAATCCTCGTTCATCGATTCTTCGATCGGAGAAATAATGTCGGACGAGGAGCACCATTTCGAGTCTAAGGCTGATGCGGGAGCATCGAAGACGTATCCTCAGCAAGCTGGAACAATCCGCAAGAACGGTTACATTGTTATCAAAAACAGGCCCTGCAAGGTTGTGGAGGTTTCCACTTCCAAAACTGGCAAGCATGGACATGCTAAGTGTCACTTTGTTGGTATTGACATCTTCACTGGGAAGAAGCTTGAAGATATTGTCCCATCTTCCCACAACTGTGATGTCCCTCATGTCAACCGCACCGATTACCAGCTCATTGATATCTCAGAGGATGGATTTGTGAGCCTGCTGACTGAGACTGGTGGAACTAAGGATGACCTCAGGCTTCCAACCGATGAAGCTCTGCTTGCGCAGATCAAGGATGGATTTGCTGAGGGTAAGGATCTGGTTGTGTCTGTGATGTCTGCTATGGGTGAGGAGCAGATTTGTGGCCTCAAGGACATTGGCCCCAAGTAA 630 0.4698 MLCRSVGVCSVYKRESEKYPHSPKFFSLSFSFSLFLNCESSFIDSSIGEIMSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGGTKDDLRLPTDEALLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1524 209 SUPERFAMILY Translation proteins SH3-like domain 65 143 IPR008991 -
Aev05g1524 209 SMART eIF_5a_2 135 204 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Aev05g1524 209 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 100 107 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Aev05g1524 209 Gene3D - 51 135 IPR014722 -
Aev05g1524 209 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 135 204 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Aev05g1524 209 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 51 206 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Aev05g1524 209 SUPERFAMILY Nucleic acid-binding proteins 136 206 IPR012340 -
Aev05g1524 209 TIGRFAM eIF_5A: translation elongation factor IF5A 67 202 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Aev05g1524 209 CDD S1_eIF5A 136 206 - -
Aev05g1524 209 PANTHER BNAA07G09420D PROTEIN 51 206 - -
Aev05g1524 209 Gene3D - 136 208 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1524 Aev-Chr5 11582450 11584922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1524 51 209 Eukaryotic Initiation Factors Gene Family AT1G13950 88.679 1.96e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1524 K03263 K02180 tcc:18604761 316.235