Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1522 ATGGCTGGCGGAGGAAACGGAGAGAGACCGCCGTGGGTGGTGACGGCTGCCGGCAGCGGCGGTGGTGGGGAGGCACCGCCGCAGAGGCCGAGCATCAGTCTGCCGCCACGTGGCAGCATGGAGAGTGTTTTCAACGGCGGTTTGAGCCCTGGTCCCATGACGCTTCTCTCCAGCTTCTTCACCGATGGCGGTGGCGGCGACGACGACTACAAGTCATTCTCTCAGCTGCTCGCCGGTGCCATGGCTTCTCCGGTGGCGGCGGCGGGATCCACTGGCCTTGTTGATTCACCTTCCTTCTTTCCGTCTTCTCAGGCAACATTAGGAATATCACACCAGCAAGCACTAGCAGAGGTCACAGCTCAAGCATCACAATCAAACTCACCTATGAATAATAATATCCAACCTCACCATTCATTCTCTGCATCAGCAACACATGCTACAACATTCACACATGTTCCTGCTGCATCCACCACCACTACTTCTACTAATAATAATCAAAACCTTATGCGCGAATCAAACGACTATCCTCACTCTAACCAGCAAAAATTGGATCCATCTTCACTGAATGTTGATAAGCCTACTGATGATGGATACAATTGGAGGAAGTATGGGCAGAAACAGGTGAAAGGTAGCGAGTTTCCGCGAAGCTATTACAAGTGCACTCATGCTAATTGTCCTGTGAAGAAGAAGGTTGAGAGGTCACTAGATGGCCATATAACTGCCATTATTTATAAAGGAGAGCATAATCACCAGCGGCCGAATCAGAACAAGCGGTCCAAAGATGCTGTGAACTCGAGTGAAGGCTTAAATGTGCAGGGGAGTGTTGATTTCAATGCTCGTGCAGAGTCTAGTCAGGCAACAGGTGAACAGATATCAGGAACAAGTGATAGTGAGGAAATAGGTGATCATGAAACTGAAGTGGATGATAAGAATAATGCTGAGCCTGATCCTAAGAGGAGGAATACAGAAGTCACACACTCAGATCAAGCTTCTTCACATAGGACAGTCACAGAGCCAAGAATCATTGTGCAAACAACAAGTGAAGTCGATCTATTAGATGACGGATATCGATGGCGCAAGTATGGGCAGAAAGTTGTCAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAAGCCAAGGTTGTAATGTTCGGAAGCATGTGGAGAGAGCTTCAACAGATCCAAAAGCTGTCATAACAACATATGAAGGAAAGCATAACCATGATGTTCCAGCAGCTAAGACTAATAGCCACACTATTGCCAACAACACTGCAACACAGTTAAGATCACAAAATGCCACACCTGAGATTCATGGTTATGGTGGAAACAGAGCAACTGCTGCCAATGATCAACATCATCAACAACCTGTTGCACGTTTAAGGCTGAAGGAAGAACAGATAACATAG 1410 0.473 MAGGGNGERPPWVVTAAGSGGGGEAPPQRPSISLPPRGSMESVFNGGLSPGPMTLLSSFFTDGGGGDDDYKSFSQLLAGAMASPVAAAGSTGLVDSPSFFPSSQATLGISHQQALAEVTAQASQSNSPMNNNIQPHHSFSASATHATTFTHVPAASTTTTSTNNNQNLMRESNDYPHSNQQKLDPSSLNVDKPTDDGYNWRKYGQKQVKGSEFPRSYYKCTHANCPVKKKVERSLDGHITAIIYKGEHNHQRPNQNKRSKDAVNSSEGLNVQGSVDFNARAESSQATGEQISGTSDSEEIGDHETEVDDKNNAEPDPKRRNTEVTHSDQASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSQGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNTATQLRSQNATPEIHGYGGNRATAANDQHHQQPVARLRLKEEQIT* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1522 469 ProSiteProfiles WRKY domain profile. 195 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1522 469 Gene3D WRKY domain 337 413 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev05g1522 469 Gene3D WRKY domain 184 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev05g1522 469 MobiDBLite consensus disorder prediction 281 339 - -
Aev05g1522 469 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 468 IPR044810 GO:0003700
Aev05g1522 469 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 88 IPR044810 GO:0003700
Aev05g1522 469 ProSiteProfiles WRKY domain profile. 347 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1522 469 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 90 468 - -
Aev05g1522 469 Pfam WRKY DNA -binding domain 353 409 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1522 469 Pfam WRKY DNA -binding domain 195 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1522 469 SUPERFAMILY WRKY DNA-binding domain 344 412 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev05g1522 469 MobiDBLite consensus disorder prediction 1 46 - -
Aev05g1522 469 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 25 88 - -
Aev05g1522 469 MobiDBLite consensus disorder prediction 433 469 - -
Aev05g1522 469 MobiDBLite consensus disorder prediction 244 265 - -
Aev05g1522 469 MobiDBLite consensus disorder prediction 281 295 - -
Aev05g1522 469 MobiDBLite consensus disorder prediction 154 205 - -
Aev05g1522 469 SUPERFAMILY WRKY DNA-binding domain 192 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev05g1522 469 MobiDBLite consensus disorder prediction 296 327 - -
Aev05g1522 469 MobiDBLite consensus disorder prediction 154 188 - -
Aev05g1522 469 SMART WRKY_cls 194 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev05g1522 469 SMART WRKY_cls 352 411 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1522 Aev-Chr5 11545711 11554460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1522 29 77 WRKY Transcription Factor Family AT2G03340 58.824 4.79e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev05g1522 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1522 - - gmx:100127369 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1522 05 11545711 11554460 Aev05g1522 05 11545711 11554460 ECH
Aev05g1522 05 11545711 11554460 Aev03g0518 03 3794863 3798428 PCT