Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1502 ATGGAGGGAAGAACTAGCTCTGAACTCCCACCTGGGTTCAGATTTCACCCAACAGATGAGGAACTAATTGTGTACTACCTTTGTAACCAAGCCACATCTAAGCCATGTCCTGCATCTATCATCCCAGAAGTTGATATCTATAAGTTTGATCCATGGGAATTGCCTGAAAAAACAAGCTTTGGAGAGAATGAATGGTACTTCTTTACCCCAAGAGACAGGAAATACCCAAATGGGGTGAGGCCTAATAGAGCAACAGTTTCAGGGTATTGGAAAGCTACTGGAACAGATAAAGCAATCTATAGTGGGTCTAAGCATGTTGGGGTGAAGAAAGCTTTGGTCTTTTACAAGGGTAGGCCCCCAAAGGGTATGAAAACAGATTGGATCATGCATGAGTATAGATTGGTTGGATCAAGAAGACAAACCAACAACAAGCAAATTGGGTCCATGAGGCTAGATGACTGGGTATTGTGCAGGATCTATAAGAAGAGGAGCATAGGGAAAACATTGTTGGAGCCAAAAGAGGAAGAATACCCAACAACACAGATCAATCTAACAGCACCAAATATTATTGATGAGAATGAACACCAAGAAATGTTGAAATTCCCAAGGACTTGTTCCCTTACTCATCTTTTGGATATGGATTACTTGGGCCCTATTTCACAGATTCTATCTGATGGATCATATAACTCAACCTTTGATTTTCAACTAAACAGTGCAAATGTTGGAATGGACCCATTTGTGAAACCCCAGCTTCTTGAAATGCCTAATTATGCACAAGATTCAGGGAAGTACTTAGTGAAACAGAATAGCACCACCATCAACCCTACCATATTTGTGAACCAATTGTTTGATCAGAGTGGATAA 864 0.4074 MEGRTSSELPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPEKTSFGENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKALVFYKGRPPKGMKTDWIMHEYRLVGSRRQTNNKQIGSMRLDDWVLCRIYKKRSIGKTLLEPKEEEYPTTQINLTAPNIIDENEHQEMLKFPRTCSLTHLLDMDYLGPISQILSDGSYNSTFDFQLNSANVGMDPFVKPQLLEMPNYAQDSGKYLVKQNSTTINPTIFVNQLFDQSG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1502 287 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Aev05g1502 287 PANTHER NAC TRANSCRIPTION FACTOR 56 1 243 - -
Aev05g1502 287 ProSiteProfiles NAC domain profile. 9 162 IPR003441 GO:0003677|GO:0006355
Aev05g1502 287 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 1 243 - -
Aev05g1502 287 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Aev05g1502 287 SUPERFAMILY NAC domain 5 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1502 Aev-Chr5 11308434 11309907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1502 1 222 NAC Transcription Factor Family AT1G69490 68.996 2.56e-113 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev05g1502 NAM 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1502 - - gmx:732552 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1502 05 11308434 11309907 Aev05g1502 05 11308434 11309907 ECH