Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1488 ATGGGAGGAGGATCTAGTTCTTACACCTTCTCCACATTTTTCATCAACTCGGCCTTTGGAAGCGACAAGAGTGGAATTCCTCTCCTCAAGAGCCACCCAAAGCTCTTCGCAACTTTTTTGCAGATTCTCTATCTGAGAACCTGTCAAGCTATATTCCTTCATTCTCAAGATGAGAAGCAAGGAAGGCCCCTCTCACTCTTAGGCTCATCGACTCCATCATCTAGCAGAGCCAAGCTACTCCAACATCTTTCACACGACCCAAGCGGCTGTCAAATTGTGCTTTCTTTTGTCGATCTGTTCAAAAACAGACACAGACCAGAAGCAGTAAATGTTCATCATGAAAGACAAACACATTTTGCTAGAGCTGAAGGGAAAATGGCTCTCATTGGCTTGCTCTTGGTGTGTTCCCTCACAATGTTCTCCTATGCCTATGGCTATGGCTATGGTGGAGGATGGGTTAATGCTCATGCTACCTTCTATGGAGGGAGTGATGCTTCAGGGACAATGGGTGGGGCTTGTGGGTATGGGAACCTATACAGCCAGGGATATGGAACAAATACTGCAGCACTGAGCACTGCTCTGTTCAACAATGGTTTGAGCTGTGGCTCATGTTATGAGATTAGGTGTGTGAGTGACCACAGGTGGTGCCTACCTGGGTCAATCATGGTCACAGCCACCAATTTCTGCCCACCAAACAATGCCTTACCCAACAATGCAGGAGGGTGGTGCAACCCTCCCCTGCATCACTTCGATCTTGCTCAGCCTGTCTTCCTCAGAATTGCTCAGTACAGAGCTGGAATTGTTCCTGTTGCTTACAGAAGGGTACCCTGCAGGAGAAGGGGAGGCATCAGGTTCACAATCAATGGACACTCCTACTTCAACCTAGTCCTAATCACAAACGTTGGTGGTGCTGGTGATGTTCATTCTGTGGCAATCAAAGGCTCAAGAACTGGTTGGATGCCAATGTCAAGGAATTGGGGACAGAATTGGCAAAGCAACAATTACCTCAATGGTCAGAGTCTCTCTTTTAAGGTCACAACCAGTAATGGCCAAAGTGTTGTGTCCTACAATGTTGCCCCTGCTGGTTGGTCCTTTGGCCAAACCTACACTGGTGCTCAATTCCGCTAA 1128 0.4761 MGGGSSSYTFSTFFINSAFGSDKSGIPLLKSHPKLFATFLQILYLRTCQAIFLHSQDEKQGRPLSLLGSSTPSSSRAKLLQHLSHDPSGCQIVLSFVDLFKNRHRPEAVNVHHERQTHFARAEGKMALIGLLLVCSLTMFSYAYGYGYGGGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCVSDHRWCLPGSIMVTATNFCPPNNALPNNAGGWCNPPLHHFDLAQPVFLRIAQYRAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSVAIKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSNGQSVVSYNVAPAGWSFGQTYTGAQFR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1488 375 SUPERFAMILY PHL pollen allergen 279 371 IPR036749 -
Aev05g1488 375 SUPERFAMILY Barwin-like endoglucanases 133 300 IPR036908 -
Aev05g1488 375 PANTHER EXPANSIN-A15 131 374 IPR002963 GO:0009664
Aev05g1488 375 PRINTS Expansin/Lol pI family signature 151 166 IPR007118 GO:0005576
Aev05g1488 375 PRINTS Expansin/Lol pI family signature 357 371 IPR007118 GO:0005576
Aev05g1488 375 PRINTS Expansin/Lol pI family signature 319 333 IPR007118 GO:0005576
Aev05g1488 375 PRINTS Expansin/Lol pI family signature 265 281 IPR007118 GO:0005576
Aev05g1488 375 PRINTS Expansin/Lol pI family signature 191 209 IPR007118 GO:0005576
Aev05g1488 375 PRINTS Expansin/Lol pI family signature 169 187 IPR007118 GO:0005576
Aev05g1488 375 Pfam Lytic transglycolase 187 272 IPR009009 -
Aev05g1488 375 Gene3D - 282 374 IPR036749 -
Aev05g1488 375 Pfam Expansin C-terminal domain 283 360 IPR007117 -
Aev05g1488 375 PRINTS Expansin signature 281 293 IPR002963 GO:0009664
Aev05g1488 375 PRINTS Expansin signature 257 270 IPR002963 GO:0009664
Aev05g1488 375 PRINTS Expansin signature 328 349 IPR002963 GO:0009664
Aev05g1488 375 PRINTS Expansin signature 293 314 IPR002963 GO:0009664
Aev05g1488 375 PRINTS Expansin signature 182 196 IPR002963 GO:0009664
Aev05g1488 375 PRINTS Expansin signature 357 373 IPR002963 GO:0009664
Aev05g1488 375 PRINTS Expansin signature 240 257 IPR002963 GO:0009664
Aev05g1488 375 PRINTS Expansin signature 221 231 IPR002963 GO:0009664
Aev05g1488 375 PRINTS Expansin signature 209 220 IPR002963 GO:0009664
Aev05g1488 375 PANTHER EXPANSIN 131 374 - -
Aev05g1488 375 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 170 282 IPR007112 -
Aev05g1488 375 SMART dpbb_1 187 272 IPR007112 -
Aev05g1488 375 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 292 371 IPR007117 -
Aev05g1488 375 Gene3D - 141 278 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1488 Aev-Chr5 11153215 11158735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1488 124 375 Expansin Gene Family AT2G03090 81.349 6.76e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1488 - - gmx:100796316 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1488 05 11153215 11158735 Aev05g1488 05 11153215 11158735 ECH
Aev05g1488 05 11153215 11158735 Aev01g2134 01 25706693 25708798 ECH